Bilkent Journal Publications

Department of Molecular Biology and Genetics
Select a period:
 2022
  • Bolze A, Mogensen TH, Zhang SY, Abel L, Andreakos E, Arkin LM, Borghesi A, Brodin P, Hagin D, Novelli G, Okada S, Peter J, Renia L, Severe K, Tiberghien P, Vinh DC, T. Ozcelik, "Decoding the Human Genetic and Immunological Basis of COVID 19 mRNA Vaccine-Induced Myocarditis", J of Clinical Immunology, 42, 1354-1359 (2022)  PDF
  • C.B. Korol, S. Belkaya, F. Alsohime, L. Lorenzo, S. Boisson-Dupuis, J. Brancale, A-L. Neehus, S. Vilarinho, A. Zobaida, R. Halwani, S. Al-Muhsen, J-L. Casanova, E. Joanguy, "Fulminant Viral Hepatitis in Two Siblings with Inherited IL‑10RB Defciency", J of Clinical Immunology..  PDF
  • I. Cagnan, M. Keles, A.G. Keskus, M. Tombaz, O.B. Sahan, F.Aerts-Kaya, D. Uckan-Cetinkaya, O. Konu, A. Gunel-Ozcan, "Global miRNA expression of bone marrow mesenchymal stem/stromal cells derived from Fanconi anemia patients", Human Cell, 35, 111-124 (2022)  PDF
  • N. Surucu Yilmaz, S.B. Eltan, B. Kayaoglu, B.Geckin, …, I. Gursel, A. Ozen, S. Baris, M. Gursel, "Low Density Granulocytes and Dysregulated Neutrophils driving Autoinflammatory Manifestations in NEMO deficiency", J of Clinical Immunology, 42, 582-596 (2022)  PDF
  • Z.G. Tepe, Y.Y. Yazici, U. Tank, L.I. Kose, M. Ozer, C. Aytekin, S. Belkaya, "Inherited IRAK-4 Deficiency in Acute Human Herpesvirus-6 Encephalitis", J of Clinical Immunology..  PDF
  • O. Cizmecioglu, "p110α activity at the M-to-G1 transition is critical for cellular proliferation and reentry into the cell cycle", Turkish J of Biology, 46, 207-215 (2022)  PDF
  • S.I. Goktuna, "IKBKE-driven TPL2 and MEK1 phosphorylations sustain constitutive ERK1/2 activation in tumor cells", EXCLI Journal, 21, 436-453 (2022)  PDF
  • A.G. Keskus, M. Tombaz, B.I. Arici, F.B. Dincaslan, A. Nabi, H. Shehwana, O. Konu, "Functional analysis of co-expression networks of zebrafish ace2 reveals enrichment of pathways associated with development and disease", Genome, 65, 57-74 (2022)  PDF
  • E. Andreakos, L. Abel, D.C. Vinh, …., T. Ozcelik, Q. Pan-Hammarstrom, …, A.N. Spaan, "A global effort to dissect the human genetic basis of resistance to SARS-CoV-2 infection", Nature Immunology, 23, 159-164 (2022)  PDF
  • J. Manry, P. Bastard, A. Gervais, …., T. Ozcelik, …., L. Abel, A. Cobat, "The risk of COVID-19 death is much greater and age dependent with type I IFN autoantibodies", Proceedings of National Academy of Sciences USA, 24, 119-1--21 (2022)  PDF
  • M. Tombaz, C. Yanyatan, A.G. Keskus, O. Konu, "Extraction and Prioritization of a Gene-Cancer-By Survival Network Involved in Homeostasis of Intracellular Calcium Concentrations Using TCGA PANCAN Data", Bioelectricity, 4, 92-102 (2022)  PDF
  • P. Bastard, S. Vazquez, J. Liu, M.T. Laurie, ….T. Ozcelik, ….., J-L. Casanova, J.L. DeRisi, "Vaccine breakthrough hypoxemic COVID-19 pneumonia in patients with auto-Abs neutralizing type I IFNs", Science Immunology., 1-18 (2022)  PDF
  • P. Brodin, G. Casari, L. Townsend, C. O'Farrelly, I. Tancevski, J. Loffler-Ragg, T.H. Mogensen, J.L. Casanova, T. Ozcelik, "Studying severe long COVID to understand post-infectious disorders beyond COVID-19", Nature Medicine, 28, 879-882 (2022)  PDF
  • Q. Chen, M.A. Cevher, Q. Jiang, S. Wang, X. Sun, R.G. Roeder, M. Chen, "LYL1 facilitates AETFC assembly and gene activation by recruiting CARM1 in t(8;21) AML", Proceedings of National Academy of Sciences USA, 119, 1-10 (2022)  PDF
  • Q. Zhang, A. Pizzorno, L. Miorin, P. Bastard, A. Gervais, …., T. Ozcelik, …., S. Trouillet-Assant, A. Garcia-Sastre, J-L. Casanova, "Autoantibodies against type I IFNs in patients with critical influenza pneumonia", J of Experimental Medicine, 219, 1-29 (2022)  PDF
  • Q. Zhang, D. Matuozzo, J. Le Pen, …., T. Ozcelik, …., G. Morelle, M. Zatz, L.F.P. Ng, D.C. Lye, B.E. Young, Y.S. Leo, …., A. Cobat, J-L. Casanova, "Recessive inborn errors of type I IFN immunity in children with COVID-19 pneumonia", J of Experimental Medicine, 219, 1-30 (2022)  PDF
  • Q. Zhang, P. Bastard, T. Ozcelik, A. Cobat, J.L. Casanova, "Human genetic and immunological determinants of critical COVID 19 pneumonia", Nature, 603, 587-598 (2022)  PDF
  • T.M. Campbell, Z. Liu, Q. Zhang, M. Moncada-Velez, …., T. Ozcelik…., I. Meyts, Y.T. Bryceson, "Respiratory viral infections in otherwise healthy humans with inherited IRF7 deficiency", J of Experimental Medicine, 219, 1-26 (2022)  PDF
  • V. Gok, S. Erdem, Y. Haliloglu, A. Bisgin, S. Belkaya, K. Basaran, A. Ozcan, E. Yilmaz, C. Acipayam, M. Karakukcu, H. Canatan, H. Per, T. Patiroglu, A. Eken, M. Canatan, E. Unal, "Immunodeficiency Associated with A Novel Functionally Defective Variant of SLC19A1 Benefits from Folinic Acid Treatment", Genes and Immunity..  PDF
 2021
  • IC.Yilmaz, EM. Ipekoglu, A. Bulbul, N. Turay, M. Yildirim, I. Evcili, NS. Yilmaz, N. Guvencli, …, I. Gursel, M. Gursel, "Development and preclinical evaluation of virus-like particle vaccine against COVID-19 infection", Allergy..  PDF
  • H. Shehwana, A.G. Keskus, S.E. Ozdemir, A.A. Acikgoz, R. Biyik-Sit, I. Cagnan, D. Gunes, E. Jahja, S. Cingir-Koker, G. Olmezer, C. Sucularli, O. Konu, "CHRNA5 belongs to the secondary estrogen signaling network exhibiting prognostic significance in breast cancer", Cellular Oncology, 44, 453-472 (2021)  PDF
  • F. Zengin-Karadayi, M. Yaman, M.M. Kisla, O. Konu, Z. Ates-Alagoz, "Design, synthesis, anticancer activity, molecular docking and ADME studies of novel methylsulfonyl indole-benzimidazoles in comparison with ethylsulfonyl counterparts", New J of Chemistry, 45, 9010-9019 (2021)  PDF
  • C. Ozdemir, N. Akcelik, F. N. Ozdemir, I. Evcili, T. Kahraman, I. Gursel, M. Akcelik, "The role of bcsE gene in the pathogenicity of Salmonella", Pathogens and Disease, 79, 1-11 (2021)  PDF
  • A. Ozhan, M. Tombaz, O. Konu, "SmulTCan: A Shiny application for multivariable survival analysis of TCGA data with gene sets", Computers in Biology and Medicine, 137, 104793-1--9 (2021)
  • J.C. Fernandez-Checa, P. Bagnaninchi, H. Ye, …, O. Konu, …., F.J. Cubero, L.J. Nelson, "Advanced preclinical models for evaluation of drug-induced liver injury – consensus statement by the European Drug-Induced Liver Injury Network [PRO-EURO-DILI-NET]", J of Hepatology, 75, 935-959 (2021)
  • L.M. Arkin, J.J. Moon, J.M. Tran, …., S. Okada, T. Ozcelik, A.A. Tayoun, …, Y-L. Lau, "From Your Nose to Your Toes: A Review of Severe Acute Respiratory Syndrome Coronavirus 2 Pandemic‒Associated Pernio", J of Investigative Dermatology, 141, 2791-2796 (2021)
  • M. Vural-Ozdeniz, A. Akturk, M. Demirdizen, R. Leka, R. Acar, O. Konu, "CoVrimer: A tool for aligning SARS-CoV-2 primer sequences and selection of conserved/degenerate primers", Genomics, 113, 3174-3184 (2021)
  • M. Yildirim, T.C. Yildirim, N. Turay, T. Bildik, B. Ibibik, I. Evcili, P.G. Ersan, U.M. Tokat, O. Sahin, I. Gursel, "TLR Ligand Loaded Exosome Mediated Immunotherapy of Established Mammary Tumor In Mice", Immunology Letters, 239, 32-41 (2021)
  • A. Ozhan, M. Tombaz, O. Konu, "Discovery of Cancer-Specific and Independent Prognostic Gene Subsets of the Slit-Robo Family Using TCGA-PANCAN Datasets", OMICS A J of Integrative Biology, 25, 1-14 (2021)  PDF
  • D. Gozen, D.C. Kahraman, K. Narci, H. Shehwana, O. Konu, E. Cetin-Atalay, "Transcriptome profiles associated with selenium deficiency dependent oxidative stress identify potential diagnostic and therapeutic targets in liver cancer cells", Turkish J of Biology, 45, 149-161 (2021)  PDF
  • E. Vezir, E. Civelek, E.D. Misirlioglu, M. Toyran, M. Capanoglu, E. Karakus, T. Kahraman, M. Ozguner, F. Demirel, I. Gursel, C.N. Kocabas, "Effects of Obesity on Airway and Systemic Inflammation in Asthmatic Children", International Archives of Allergy and Immunology, 182, 679-689 (2021)  PDF
  • M.E. Kars, A.N. Basak, O.E. Onat, K. Biguvar, …., J.M. Friedman, T. Ozcelik, "The genetic structure of the Turkish population reveals high levels of variation and admixture", Proceedings of National Academy of Sciences USA, 118, 1-10 (2021)  PDF
  • P. Bastard, A. Gervais, T. Le Voyer, …., T. Ozcelik, …., L. Abel, J.L. Casanova, "Autoantibodies neutralizing type I IFNs are present in ~4% of uninfected individuals over 70 years old and account for ~20% of COVID-19 deaths", Science Immunology, 19.
  • S. Targen, O. Konu, "Zebrafish Xenotransplantation Models for Studying Gene Function and Drug Treatment in Hepatocellular Carcinoma", J of Gastrointestinal Cancer, 52, 1248-1265 (2021)  PDF
  • T. Asano, B. Boisson, F. Onodi, D. Matuozzo, …, T. Ozcelik, …, Q. Zhang, J-L. Casanova, "X-linked recessive TLR7 deficiency in ~1% of men under 60 years old with life-threatening COVID-19", Science Immunology, 6, 1-22 (2021)  PDF
  • T. Asano, J. Khourieh, P. Zhang, F. Rapaport, …, T. Ozcelik, B. Boisson, "Human STAT3 variants underlie autosomal dominant hyper-IgE syndrome by negative dominance", J of Experimental Medicine, 218, 20202592-1--32 (2021)  PDF
  • V. Sancho-Shimizu, P. Brodin, A. Cobat, … ,T. Ozcelik, …, S-Y. Zhang, "SARS-CoV-2-related MIS-C: A key to the viral and genetic causes of Kawasaki disease?", J of Experimental Medicine, 218, 1-16 (2021)  PDF
 2020
  • F.Z. Karadayi, M. Yaman, M.M. Kisla, A.G. Keskus, O. Konu, Z. Ates-Alagoz, "Design, synthesis and anticancer/antiestrogenic activities of novel indole-benzimidazoles", Bioorganic Chemistry, 100, 103929-1--20 (2020)  PDF
  • J.L. Casanova, H.C. Su, L. Abel, A. Aiuti, …, T. Ozcelik, …, Q. Zhang, S. Zhang, "A Global Effort to Define the Human Genetics of Protective Immunity to SARS-CoV-2 Infection", Cell, 181, 1194-1199 (2020)  PDF
  • M. Esmaeili, M. Keshani, M. Vakilian, M. Esmaeili, M. Peymani, F.S. Forootan, T.L. Chau, S.I. Goktuna, S.R. Zaker, M.H.N. Esfahani, K. Ghaedi, "Role of non-coding RNAs as novel biomarkers for detection of colorectal cancer progression through interaction with the cell signaling pathways", Gene, 753, 144796-1--10 (2020)  PDF
  • O.S. Akar, S. Gunes, U. Abur, E. Altundag, R. Asci, O.E. Onat, T. Ozcelik, G. Ogur, "Multiscale analysis of SRY‐positive 46,XX testicular disorder of sex development: Presentation of nine cases", Andrologia., 13739-1--9 (2020)  PDF
  • P. Bastard, L.B. Rosen, …., T. Ozcelik, ….., H.C. Su, J-L. Casanova, "Autoantibodies against type I IFNs in patients with life-threatening COVID-19", Science, 370, 1-19 (2020)  PDF
  • Q. Zhang, P. Bastard, …., T. Ozcelik, …, H.C. Su, J-L. Casanova, "Inborn errors of type I IFN immunity in patients with life-threatening COVID-19", Science, 370, 1-23 (2020)  PDF
  • S. Targen, T. Kaya, M.E. Avci, D. Gunes, A.G. Keskus, O. Konu, "ZenoFishDb v1.1: A Database for Xenotransplantation Studies in Zebrafish", Zebrafish, 17, 305-318 (2020)  PDF
 2019
  • I. Cagnan, E. Cosgun, O. Konu, D. Uckan, A. Gunel-Ozcan, "PKNOX2 expression and regulation in the bone marrow mesenchymal stem cells of Fanconi anemia patients and healthy donors", Molecular Biology Reports, 46, 667-678 (2019)  PDF
  • B.M. Urgen, Y. Topac, F.S. Ustun, P. Demirayak, K.K. Oguz, T. Kansu, S. Saygi, T. Ozcelik, H. Boyaci, K. Doerschner, "Homozygous LAMC3 mutation links to structural and functional changes in visual attention networks", Neuroimage, 190, 242-253 (2019)  PDF
  • U.I. Onat, A.D. Yildirim, O. Tufanli, I. Cimen, B. Kocaturk, Z. Veli, S.M. Hamid, K. Shimada, S. Chen, J. Sin, P.K. Shah, R.A. Gottlieb, M. Arditi, E. Erbay, "Intercepting the Lipid-Induced Integrated Stress Response Reduces Atherosclerosis", J of the American College of Cardiology, 73, 1149-1169 (2019)  PDF
 2018
  • S.I. Goktuna, M.A. Diamanti, T.L. Chau, "IKKs and tumor cell plasticity", FEBS Journal, 285, 2161-2181 (2018)  PDF
  • S. Gulluoglu, E.C. Tuysuz, M. Sahin, A. Kuskucu, C.K. Yaltirik, …, A.O. Gure, O.F. Bayrak, A.B. Dalan, "Simultaneous miRNA and mRNA Transcriptome Profiling of Glioblastoma Samples Reveals a Novel Set of OncomiR Candidates and Their Target Genes", Brain Research, 1700, 199-210 (2018)  PDF
  • E. Gul, E.H. Sayar, B. Gungor, F.K. Eroglu, N. Surucu, S. Keles, …, I. Gursel, S. Ozen, I. Reisli, M. Gursel, "Type I IFN related NETosis in Ataxia Telangiectasia and Artemis deficiency", J of Allergy and Clinical Immunology, 142, 246-257 (2018)  PDF
  • G. Olgun, O. Sahin, O. Tastan, "Discovering competing endogenous RNA interactions in breast cancer intrinsic subtypes", BMC Genomics, 19, 650-1--12 (2018)  PDF
  • T.T. Olmez, E. Yuca, E. Eyupoglu, H.B. Catalak, O. Sahin, U.O.S. Seker, "Autonomous Synthesis of Fluorescent Silica Biodots Using Engineered Fusion Proteins", ACS Omega, 3, 585-594 (2018)  PDF
  • S.I. Goktuna, "IKBKE inhibits TSC1 to activate mTOR/S6K pathway for oncogenic transformation", Turkish J of Biology, 42, 268-278 (2018)  PDF
  • A. Schwab, A. Siddiqui, M.E. Vazakidou, …, O. Sahin, M. Volante, F.R. Greten, T. Brabletz, P. Ceppi, "Polyol pathways links glucose metabolism to the aggressiveness of cancer cells", Cancer Research, 78, 1604-1618 (2018)  PDF
  • M.E. Avci, A.G. Keskus, S. Targen, M.E. Isilak, M. Ozturk, R. Cetin-Atalay, M.M. Adams, O. Konu, "Development of a novel zebrafish xenograft model in ache mutants using liver cancer cell lines", Scientific Reports, 8, 1570-1--14 (2018)  PDF
  • N. Zohrap, O. Saatci, B. Ozes, I. Coban, H.M. Atay, E. Battaloglu, O. Sahin, K. Bugra, "SIK2 is a potential novel tumor suppressor simultaneously inhibiting MAPK and PI3K/Akt pathways in breast cancer", Oncotarget, 9, 21876-21892 (2018)  PDF
  • O. Saatci, S. Borgoni, O. Akbulut, S.D. Erim, U. Raza, E. Eyupoglu, C. Alkan, A. Akyol, O. Kutuk, S. Wiemann, O. Sahin, "Targeting PLK1 overcomes T-DM1 resistance via CDK1-dependent phosphorylation and inactivation of Bcl-2/xL in HER2-positive breast cancer", Oncogene, 37, 2251-2269 (2018)  PDF
  • P. Demirayak, O.E. Onat, A.O. Gevrekci, S. Gulsuner, H. Uysal, R.S. Bilgen, K. Doerschner, T. Ozcelik, H. Boyacı, "Abnormal subcortical activity in congenital mirror movement disorder with RAD51 mutation", Diagnostic and Interventional Radiology, 24, 392-401 (2018)  PDF
  • R. Shapira, N. Ilyayev, R. Attali, G. Westrich, D. Halle, C. Speter, A.O. Gure, A.J. Bilchik, …., A. Nissan, "Early Detection and Staging of Colorectal Cancer Using a Panel of Micro RNAs", J of Cancer Science and Therapy, 10, 162-168 (2018)  PDF
  • R.R. Mishra, N. Belder, S.A. Ansari, M. Kayhan, H. Bal, U. Raza, P.G. Ersan, …., O. Sahin, "Re-activation of cAMP pathway by PDE4D inhibition represents a novel druggable axis for overcoming tamoxifen resistance in ER-positive breast cancer", Clinical Cancer Research, 24, 1987-2001 (2018)  PDF
  • S. Boisson-Dupuis, N. Ramirez-Alejo, …. T. Ozcelik, A. Abid, …, J-L. Casanova, "Tuberculosis and impaired IL-23-dependent INF-G immunity in humans homozygous for a common TYK2 missense variant", Science Immunology., 1-31 (2018)  PDF
  • Z. Zhou, M. Li, L. Zhang, H. Zhao, O. Sahin, J. Chen, J. Zhao, Z. Songyang, D. Yu, "Oncogenic kinases-induced PKM2 tyrosine 105 phosphorylation converts non-oncogenic PKM2 to a tumor promoter and induces cancer stem-like cells", Cancer Research, 78, 2248-2261 (2018)  PDF
 2017
  • T. Ozcelik, "Medical genetics and genomic medicine in Turkey: a bright future at a new era in life sciences", Molecular Genetics & Genomic Medicine., 1-8 (2017)  PDF
  • B. Taskoparan, E.G. Seza, S. Demirkol, S. Tuncer, M. Stefek, A.O. Gure, S. Banerjee, "Opposing roles of the aldo-keto reductases AKR1B1 and AKR1B10 in colorectal cancer", Cellular Oncology, 40, 563-578 (2017)  PDF
  • K.M. Senses, M. Ghasemi, M.W. Akbar, M. Isbilen, A.L. Fallacara, S. Frankenburg, S. Schenone, M. Lotem, M. Botta, A.O. Gure, "Phenotype-based variation as a biomarker of sensitivity to molecularly targeted therapy in melanoma", MedChemComm, 8, 88-95 (2017)  PDF
  • G. Gucluler, E. Adiguzel, B. Gungor, T. Kahraman, M. Gursel, B. Yilmaz, I. Gursel, "Impaired toll like receptor-7 and 9 induced immune activation in chronic spinal cord injured patients contributes to immune dysfunction", Plos One, 12, 0171003-1--12 (2017)  PDF
  • A. Patke, P.J. Murphy, O.E. Onat, A.C. Krieger, T. Ozcelik, S.S. Campbell, M.W. Young, "Mutation of the Human Circadian Clock Gene CRY1 in Familial Delayed Sleep Phase Disorder", Cell, 169, 203-215 (2017)  PDF
  • B. Bayyurt, G. Tincer, K. Almacioglu, E. Alpdundar, M. Gursel, I. Gursel, "Encapsulation of two different TLR ligands into liposomes confer protective immunity and prevent tumor development", J of Controlled Release, 247, 134-144 (2017)  PDF
  • E.T. Karoglu, D.O. Halim, B. Erkaya, F. Altaytas, A. Arslan-Ergul, O. Konu, M.M. Adams, "Aging alters the molecular dynamics of synapses in a sexually dimorphic pattern in zebrafish (Danio rerio)", Neurobiology of Aging, 54, 10-21 (2017)  PDF
  • S. Tuncer, A.G. Keskus, M. Colakoglu, I. Cimen, C. Yener, O. Konu, S. Banerjee, "15-Lipoxygenase-1 re-expression in colorectal cancer alters endothelial cell features through enhanced expression of TSP-1 and ICAM-1", Cellular Signalling, 39, 44-54 (2017)  PDF
  • S. Yalcin, I. Gursel, G. Bilgen, B.H. Horuluoglu, G. Gucluer, G.T. Izzetoglu, "Effect of egg storage duration and brooding temperatures on chick growth, intestine morphology and nutrient transporters", Animal, 21, 1-7 (2017)  PDF
  • M. Bulkowska, A. Rybicka, K.M. Senses, K. Ulewicz, K. Witt, J. Szymanska, B. Taciak, R. Klopfleisch, E. Hellmen, I. Dolka, A.O. Gure, J. Mucha, M. Kimow, S. Gizinski, M. Krol, "MicroRNA expression patterns in canine mammary cancer show significant differences between metastatic and nonmetastatic tumours", BMC Cancer, 17, 728-1--16 (2017)  PDF
  • O. Tufanli, P. Telkoparan Akilli, D. Acosta-Alvear, B. Kocaturk, U.I. Onat, S.M. Hamid, I. Cimen, P. Walter, C. Weber, E. Erbay, "Targeting IRE1 with small molecules counteracts progression of atherosclerosis", Proceedings of National Academy of Sciences USA., 1395-1404 (2017)  PDF
  • R. Hill, P.A. Madureria, B. Ferreira, I. Baptista, S. Machado, L. Colaco, M. Dos Santos, N. Liu, A. Dopazo, S. Ugurel, A. Adrienn, E. Kiss-Toth, M. Isbilen, A.O. Gure, W. Link, "TRIB2 confers resistance to anti-cancer therapy by activating the serine/threonine protein kinase AKT", Nature Communications, 8, 14687-1--9 (2017)  PDF
  • S. Demirkol, I. Gomceli, M. Isbilen, B.E. Dayanc, M. Tez, E.B. Bostanci, N. Turhan, M. Akoglu, E. Ozyerli, S. Durdu, O. Konu, A. Nissan, M. Gonen, A.O. Gure, "A Combined ULBP2 and SEMA5A Expression Signature as a Prognostic and Predictive Biomarker for Colon Cancer", J of Cancer, 8, 1113-1122 (2017)  PDF
  • T. Kahraman, S. Gucluler, I. Simsek, F.C. Yagci, M. Yildirim, C. Ozen, A. Dinc, M. Gursel, L. Ikromzoda, T. Sutlu, S. Gay, I. Gursel, "Circulating LL37 targets plasma extracellular vesicles to immune cells and intensifies Behçet's disease severity", J of Extracellular Vesicles, 6, 1284449-1--13 (2017)  PDF
 2016
  • S. Tunçer, S. Tunçay Çağatay, A.G. Keşküş, M. Çolakoğlu, O. Konu, S. Banerjee, "Interplay between 15-lipoxygenase-1 and metastasis-associated antigen 1 in the metastatic potential of colorectal cancer", Cell Proliferation, 49, 448-459 (2016)  PDF
  • M. Mutlu, U. Raza, O. Saatci, E. Eyupoglu, E. Yurdusev, O. Sahin, "miR-200c: a versatile watchdog in cancer progression, EMT, and drug resistance", J of Molecular Medicine, 94, 629-644 (2016)  PDF
  • B. Gungor, E. Adiguzel, I. Gursel, B. Yilmaz, M. Gursel, "Intestinal Microbiota in Patients with Spinal Cord Injury", Plos One, 11, 0145878-1--10 (2016)  PDF
  • Kanaan SB, Onat OE, Balandraud N, Martin GV, Nelson JL, Azzouz DF, Auger I, Arnoux F, Martin M, Roudier J, T. Ozcelik, Lambert NC, "Evaluation of X chromosome inactivation with respect to HLA genetic susceptibility in rheumatoid arthritis and systemic sclerosis", Plos One, 11, 0158550-1--12 (2016)  PDF
  • M. Lotem, S. Merims, S. Frank, T. Hamburger, …, A.O. Gure, T. Peretz, "Adjuvant Autologous Melanoma Vaccine for Macroscopic Stage III Disease: Survival, Biomarkers, and Improved Response to CTLA-4 Blockade", J of Immunology Research., 8121985-1--12 (2016)  PDF
  • D. Bayik, I. Gursel, D.M. Kinman, "Structure, mechanism and therapeutic utility of immunosuppressive oligonucleotides", Pharmacol Res, 105, 216-225 (2016)  PDF
  • D.C. Watson, D. Bayik, A. Srivatsan, C. Bergamaschi, A. Valentin, G. Niu, J. Bear, M. Monninger, M. Sun, A. Morales-Kastresana, J.C. Jones, B.K. Felber, X. Chen, I. Gursel, G.N. Pavlakis, "Efficient production and enhanced tumor delivery of engineered extracellular vesicles", Biomaterials, 105, 195-205 (2016)  PDF
  • O. Bozdogan, I. Vargel, T. Cavusoglu, A.A. Karabulut, G. Karahan, N. Sayar, P. Atasoy, I. Yulug, "Metastasis Suppressor Proteins in Cutaneous Squamous Cell Carcinoma", Pathology Research and Practice, 212, 608--615 (2016)  PDF
  • S. Yalcin, I. Gursel, G. Bilgen, G.T. Izzetoglu, B.H. Horuluoglu, G. Gucluer, "Egg storage duration and hatch window affect gene expression of nutrient transporters and intestine morphological parameters of early hatched broiler chicks", Animal, 10, 805-811 (2016)  PDF
  • F. Stefano, F. Borras, E. Buzas, …, I. Gursel, …, A.B. Zavec, B. Giebel, "Evidence-Based Clinical Use of Nano-sized Extracellular Vesicles in Nanomedicine", ACS Nano, 10, 3886-3899 (2016)  PDF
  • C. Cekic, J. Linden, "Purinergic regulation of the immune system", Nature Reviews Immunology, 16, 177-192 (2016)  PDF
  • S.I. Goktuna, C. Shostak K, L. Heukamp, B. Hennuy, HQ. Duong, A. Ladang, P. Close, I. Klevernic, F. Olivier, A. Florin, G. Ehx, F. Baron, M. Vandereyken, S. Rahmouni, L. Vereecke, G. van Loo, R. Büttner, FR. Greten, A. Chariot, " The pro-survival IKK-related kinase IKKepsilon integrates LPS and IL-17A signaling cascades to promote Wnt-dependent tumor development in the intestine", Cancer Research, 76, 2587-2599 (2016)  PDF
  • T. Ozcelik, O.E. Onat, "Genomic landscape of the Greater Middle East", Nature Genetics, 48, 978-979 (2016)  PDF
  • C. Sucularli, H. Shehwana, C. Kuscu, D. Dungul, H. Ozdag, O. Konu, "Functionally conserved effects of rapamycin exposure on zebrafish", Molecular Medicine Reports, 13, 4421-4430 (2016)  PDF
  • Chia-Chi Chang, Chenyu Zhang, Qingling Zhang, O. Sahin, Hai Wang, Jia Xu, Yi Xiao, Jian Zhang, Sumaiyah K. Rehman, Ping Li, Mien-Chie Hung, Fariba Behbod, Dihua Yu, "Upregulation of lactate dehydrogenase a by 14-3-3ζ leads to increased glycolysis critical for breast cancer initiation and progression", Oncotarget, 7, 35270-35283 (2016)  PDF
  • I. Cimen, B. Kocaturk, S. Koyuncu, O. Tufanli, U.I. Onat, A.D. Yildirim, O. Apaydin, S. Demirsoy, Z.G. Aykut, U.T. Nguyen, S.M. Watkins, G.S. Hotamisligil, E. Erbay, "Prevention of Atherosclerosis by Bioactive Palmitoleate Through Suppression of Organelle Stress and Inflammasome Activation", Science Translational Medicine, 8, 358-393 (2016)  PDF
  • M. Mutlu, O. Saatci, S.A. Ansari, E. Yurdusev, H. Shehwana, O. Konu, U. Raza, O. Sahin, "miR-564 acts as a dual inhibitor of PI3K and MAPK signaling networks and inhibits proliferation and invasion in breast cancer", Scientific Reports, 6, 32541-1--14 (2016)  PDF
  • M. Nadir, O. Tufanli, E. Erbay, A. Atalay, "Identification of differentially expressed microRNAs during lipotoxic endoplasmic reticulum stress in RAW264.7 macrophages", Turkish J of Biochemistry, 41, 206-216 (2016)  PDF
  • Umar Raza, Özge Saatci, Stefan Uhlmann, Suhail A Ansari, Erol Eyüpoğlu, Emre Yurdusev, Merve Mutlu, Pelin Gülizar Ersan, Mustafa Kadri Altundağ, Jitao David Zhang, Hayriye Tatlı Doğan, Gülnur Güler, O. Sahin, "The miR-644a/CTBP1/p53 axis suppresses drug resistance by simultaneous inhibition of cell survival and epithelial-mesenchymal transition in breast cancer", Oncotarget, 7, 49859-1--19 (2016)  PDF
  • V.R. Babaev, M. Yeung, E. Erbay, L. Ding, Y. Zhang, J. May, S. Fazio, G.S. Hotamisligil, M.F. Linton, "Jnk1 deficiency in hematopoietic cells suppresses macrophage apoptosis and increases atherosclerosis in LDL-receptor null mice", Arteriosclerosis, Thrombosis, and Vascular Biology, 6, 1122-1162 (2016)  PDF
 2015
  • O. Bozdogan, I. Yulug, I. Vargel, T. Cavusoglu, A.A. Karabulut, G. Karahan, N. Sayar, "Differential Expression Patterns of Metastasis Suppressor Proteins in Basal Cell Carcinoma", Int J of Dermatology, 54, 905-915 (2015)  PDF
  • S. Yildiz, E. Alpdundar, B. Gungor, T. Kahraman, B. Bayyurt, I. Gursel, M. Gursel, "Enhanced Immunostimulatory Activity of Cyclic Dinucleotides through Complexation with a Cell Penetrating Peptide or Combined Use with CpG ODN", European J of Immunology, 45, 1170-1179 (2015)  PDF
  • Y. Oztemur, T. Bekmez, A. Aydos, I. Yulug, B. Bozkurt, B. Gur-Dedeoglu, "A ranking-based meta-analysis reveals let-7 miRNAs as a meta-signature for grade classification in breast cancer", Plos One..  PDF
  • E. Bonora, F. Bianco, L. Cordeddu, …, T. Ozcelik, S. Palanduz, …, G. Romeo, R. De Giorgio, "Mutations in RAD21 Disrupt Regulation of APOB in Patients with Chronic Intestinal Pseudo-Obstruction", Gastroenterology, 148, 771-782 (2015)  PDF
  • H. Alotaibi, M.F. Basilicata, H. Shehwana, T. Kosowan, I. Schreck, C. Braeutigam, O. Konu, T. Brabletz, M.P. Stemmler, "Enhancer cooperativity as a novel mechanism underlying the transcriptional regulation of E-cadherin during mesenchymal to epithelial transition", Biochimica et Biophysica Acta, 1849, 731-742 (2015)  PDF
  • F. Doldur-Balli, M.N. Ozel, S. Gulsuner, A.B. Tekinay, T. Ozcelik, O. Konu, M.M. Adams, "Characterization of a novel zebrafish (Danio rerio) gene, wdr81, associated with cerebellar ataxia, mental retardation and dysequilibrium syndrome (CAMRQ)", BMC Neurosciences, 16, 96-1--17 (2015)  PDF
  • N. Sayar, G. Karahan, O. Konu, B. Bozkurt, O. Bozdogan, I. Yulug, "Transgelin gene is frequently downregulated by promoter DNA hypermethylation in breast cancer", Clinical Epigenetics, 7, 104 (2015)  PDF
  • D. Sag, C. Cekic, R. Wu, J. Linden, C.C. Hedrick, "The Cholesterol transporter ABCG1 links cholesterol homeostasis and tumour immunity", Nature Communications, 6, 6354-1--14 (2015)  PDF
  • G. Karahan, N. Sayar, G. Gozum, O. Konu, I. Yulug, "Relative expression of rRNA species and 45S rDNA promoter methylation status are dysregulated in tumors in comparison with adjacent normals in breast cancer", Oncology Reports, 33, 3131-3145 (2015)
  • I. Mizrahi, H. Mazeh, R. Grinbaum, …, A.O. Gure, D. Halle, A. Nissan, "Colon Cancer Associated Transcript-I (CCATI) Expression in Adenocarcinoma of the Stomach", J of Cancer, 6, 105-110 (2015)  PDF
  • M. Yanez-Mo, P.R.M. Siljander, …. , I. Gursel, M. Gursel, …, M.H.M. Wauben, O. de Wever, "Biological properties of extracellular vesicles and their physiological functions", J of Extracellular Vesicles, 4, 1-60 (2015)  PDF
  • R.N. Hanna, C. Cekic, ….S.K. Biswas, C.C. Hedrick, "Patrolling monocytes control tumor metastasis to the lung", Science, 350, 985-990 (2015)  PDF
 2014
  • R. Haller, J.D. Zhang, E.A. Moskalev, A. Braun, C. Otto, H. Geddert, Y. Riazalhosseini, A. Ward, A. Balwierz, ..., O. Sahin, "Combined DNA methylation and gene expression profiling in gastrointestinal stromal tumors reveals hypomethylation of SPP1 as an independent prognostic factor", Int J of Cancer, 136, 1013-1023 (2014)  PDF
  • B. Gungor, F.C. Yagci, I. Gursel, M. Gursel, "Forging a potent vaccine adjuvant: CpG ODN/cationic peptide nanorings", Oncolmmunology, 3, 950166-1--3 (2014)  PDF
  • E.E. Gurdal, I. Durmaz, R. Cetin-Atalay, M. Yarim, "Synthesis and cytotoxicity studies of novel benzhydrylpiperazine carboxamide and thioamide derivatives", J of Enzyme Inhibition and Medicinal Chemistry, 29, 205-214 (2014)
  • K. Kucukoglu, H.I. Gul, R. Cetin-Atalay, Y. Baratli, A-L. Charles, M. Sukuroglu, M. Gul, B. Geny, "Synthesis of new N,N'-bis[1-aryl-3-(piperidine-1-yl)propylidene] hydrazine dihydrochlorides and evaluation of their cytotoxicity against human hepatoma and breast cancer cells", J of Enzyme Inhibition and Medicinal Chemistry, 29, 420-426 (2014)  PDF
  • U. Raza, J.D. Zhang, O. Sahin, "MicroRNas: master regulators of drug resistance, stemness and metastasis", J of Molecular Medicine, 92, 321-336 (2014)  PDF
  • S. Yilmaz-Ozcan, A. Sade, B. Kucukkaraduman, Y. Kaygusuz, K.M. Senses, S. Banerjee, A.O. Gure, "Epigenetic Mechanisms Underlying the Dynamic Expression of Cancer-Testis Genes, PAGE2, -2B and SPANX-B, during Mesenchymal-to-Epithelial Transition", Plos One, 9, 107905-1--11 (2014)  PDF
  • T. Ersahin, L. Carkacioglu, T. Can, O. Konu, V. Atalay, Plos One, 9, 933141-1--14 (2014)  PDF
  • Y. Kam, A. Rubinstein, S. Naik, I. Djavsarov, D. Halle, I. Ariel, A.O. Gure, A. Stojadinovic, H. Pan, V. Tsivin, A. Nissan, E. Yavin, "Detection of a long non-coding RNA (CCAT1) in living cells and human adenocarcinoma of colon tissues using FIT-PNA molecular beacons", Cancer Letters, 352, 90-96 (2014)  PDF
  • S. Atakan, H. Bayiz, S. Sak, A. Poyraz, B. Vural, A.S. Yildirim, F. Demirag, A.O. Gure, "Autologous anti-SOX2 antibody responses reflect intensity but not frequency of antigen expression in small cell lung cancer", BMC Clinical Pathology, 14, 1-8 (2014)  PDF
  • J. Pennakalathil, E. Jahja, E.S. Ozdemir, O. Konu, D. Tuncel, "Red emitting cucurbituril-capped, pH-responsive conjugated oligomer-based nanoparticles for drug delivery and cellular Imaging", Biomacromolecules, 15, 3366-3374 (2014)  PDF
  • O. Sahin, Q. Wang, S.W. Brady, K. Ellis, H. Wang, C-C. Chang, Q. Zhang, P. Priya, R. Zhu, S.T. Wong, M.D. Landis, W.J. Muller, F.J. Esteva, J. Chang, D. Yu, "Biomarker-guided sewuential targeted therapies to overcome therapy resistance in paridly evolving highly aggressive mammary tumors", Cell Research, 24, 542-559 (2014)  PDF
  • A. Ward, K. Shukla, A. Balwierz, Z. Soons, R. Konig, O. Sahin, S. Wiemann, "MicroRNA-519a is a novel oncomir conferring tamoxifen resistance by targeting a network of tumour-suppressor genes in ER+ breast cancer", J of Pathology, 233, 368-379 (2014)  PDF
  • B. Gungor, F.C. Yagci, G. Tincer, B. Bayyurt, E. Alpdundar, S. Yildiz, M. Ozcan, I. Gursel, M. Gursel, "CpG ODN Nanorings Induce IFNx from Plasmacytoid Dendritic Cells and Demonstrate Potent Vaccine Adjuvant Activity", Science Translational Medicine, 6, 235-261 (2014)  PDF
  • G.M. Dal, B. Erguner, M.S. Sagiroglu, B. Yuksel, O.E. Onat, C. Alkan, T. Ozcelik, "Early postzygotic mutations contribute to de novo variation in a healthy monozygotic twin pair", J of Medical Genetics, 51, 455-459 (2014)  PDF
  • H. Unal-Gulumser, S. Gulsuner, F.N. Mercan, O.E. Onat, T. Walsh, H. Shahin, M.K. Lee, O. Dogu, T. kansu, H. topaloglu, B. Elibol, C. Akbostanci, M.C. King, T. Ozcelik, A.B. Tekinay, "Mitochondrial serine protease HTRA2 p.G3999S in a kindred with essential tremor and Parkinson disease", Proceedings of National Academy of Sciences USA, 111, 18285-18290 (2014)  PDF
  • J. Shih, M. Rahman, Q.T. Luong, S.H. Lomeli, J. Riss, R.M. Prins, A.O. Gure, G. Zeng, "Dominant B-cell epitopes from cancer/stem cell antigen SOC2 recognized by serum samples from cancer patients", American J of Clin Exp Immunol, 3, 84-90 (2014)  PDF
  • O. Gezici, I. Durmaz, E. Bilget Guven, O. Unal, A. Ozgun, R. Cetin-Atalay, D. Tuncel, "Dual functionality of conjugated polymer nanoparticles as an anticancer drug carrier and a fluorescent probe for cell imaging", RSC Advances, 4, 1302-1309 (2014)  PDF
  • S. Knappskog, L.B. Gansmo, K. Dibirova, A. Metspalu, … , T. Ozcelik, P. Zalloua, F. Mouzaya, E. Bliznetz, …., O. Balanovsky, P.E. Lonning, "Population distribution and ancestry of the cancer protective MDM2 SNP285 (rs117039649)", Oncotarget, 5, 8223-8234 (2014)  PDF
 2013
  • C. Sackesen, M. Akdis, O. Soyer, J. Zumkehr, B. Ruckert, O. Kalayci, S.S. Alkan, I. Gursel, C.A. Akdis, "Suppression of B cell activation and IgE, IgG1 and IgG4 production by mammalian telomeric oligonucleotides", Allergy, 68, 593-603 (2013)  PDF
  • B.E. Dayanc, S. Bansal, A.O. Gure, S.O. Gollnick, E.A. Repasky, "Enhanced sensitivity of colon tumour cells to natural killer cell cytotoxicity after mild thermal stress is regulated through HSF1-mediated expression of MICA", Int J of Hyperthermia, 29, 480-490 (2013)
  • O. Osmanagaoglu, F. Kiran, F.C. Yagci, I. Gursel, "Immunomodulatory function and in vivo properties of Pediococcus pentosaceus OZFi apromising probiotic strain", Annals of Microbiology, 63, 1311-1318 (2013)
  • F. Keskin, A. Suhre, K. Kose, T. Ersahin, A.E. Cetin, R. Cetin-Atalay, "Image Classification of Human Carcinoma Cells Using Complex Wavelet-Based Covariance Descriptors", Plos One, 8, 52807 (2013)  PDF
  • G. Yildiz, A.Arslan-Ergul, S. Bagislar, O. Konu, H. Yuzugullu, O. Gursoy-Yuzugullu, N. Ozturk, C. Ozen, H. Ozdag, E. Erdal, S. Karademir, O. Sagol, D. Mizrak, H. Bozkaya, H.G. Ilk, O. Ilk, B. Bilen, R. Cetin-Atalay, N. Akar, M. Ozturk, "Genome-Wide Transcriptional Reorganization Associated with Senescence-to-Immortality Switch during Human Hepatocellular Carcinogenesis", Plos One, 8, 64016-1--13 (2013)  PDF
  • B. Vural, E. Sehitoglu, F. Cavus, N. Yalcinkaya, H. Haytural, M. Kucukerden, C. Ulusoy, E. Ugurel, S. Turan, L. Bulut, R. Turkoglu, E. Shugaiv, M. Kurtuncu, S. Atakan, A.O. Gure, A. Gul, M. Eraksoy, G. Akman-Demir, E. Tuzun, "Mitochondrial carrier homolog 1 (Mtch 1) antibodies in neuro-behcet's disease", J of Neuroimmunology, 263, 139-144 (2013)  PDF
  • G. Bayramoglu, V. Bitirim, Y. Tunali, M.Y. Arica, K.C. Akcali, "Poly (hydroxyethyl methacrylate-glycidyl methacrylate) films modified with different functional groups: In vitro interactions with platelets and rat stem cells", Materials Science and Engineering C, 33, 801-810 (2013)  PDF
  • S. Okay, E. Ozcengiz, I. Gursel, G. Ozcengiz, "Immunogeneticity and protective efficacy of the recombinant Pasteurella lipoprotein E and outer membrane protein H from Pasteurella multocida A:3 in mice", Res Vet Sci, 93, 1261-1265 (2013)  PDF
  • B. Alaiyan, N. Ilyayev, A. Stojadinovic, M. Izadjoo, M. Roistacher, V. Pavlov, V. Tzivin, D. Halle, H. Pan, B. Thrink, A.O. Gure, A. Nissan, "Differential expression of colon cancer associated transcript1 (CCAT1) along the colonic adenoma-carcinoma sequence", BMC Cancer, 17, 196 (2013)  PDF
  • K.M. Senses, M. Gonen, A.R. Barutcu, Z. Kalaylioglu, M. Isbilen, O. Konu, Y.T. Chen, N.K. Altorki, A.O. Gure, "Cancer-testis gene expression is associated with the methylenetetrahydrofolate reductase 677 C>T polymorphism in non-small cell lung carcinoma", BMC Medical Genetics, 14, 97 (2013)
  • T. Ozcelik, "2012 William Allan Award introduction: Uta Francke", American J of Human Genetics, 92, 323-324 (2013)  PDF
  • C. Simioni, A.M. Martelli, A. Cani, R. Cetin-Atalay, J.A. McCubrey, S. Capitani, L.M. Neri, "The AKT Inhibitor MK-2206 is Cytotoxic in Hepatocarcinoma Cells Displaying Hyperphosphorylated AKT-1 and Synergizes with Conventional Chemotherapy", Oncotarget, 4, 1496-1506 (2013)
  • E.E. Gurdal, M. Yarim, I. Durmaz, R. Cetin-Atalay, "Cytotoxic Activities of some Novel Benzhydrylpiperazine Derivatives", Drug Res Stuttgart, 63, 121-128 (2013)
  • G. Okten, S. Gunes, O.E. Onat, A. Tukun, T. Ozcelik, I. Kocak, "Disruption og HDX gene in premature ovarian failure", Systems Biology in Reproductive Medicine, 59, 218-222 (2013)
  • M. Gursel, D.M. Klinman, I. Gursel, "Plasmacytoid dendritic cell responses to CpG Odn correlate with CXCL16 expression levels", Mediators of Inflammation..  PDF
  • M. Isbilen, K.M. Senses, A.O. Gure, "Predicting Chemotherapy Sensitivity Profiles for Breast Cancer Cell Lines with and Without Stem Cell-Like Features", Current Signal Transduction Therapy, 8, 268-273 (2013)  PDF
  • M.T. Camci, N. Sayar, I.G. Yulug, S. Suzer, "Zn Prolongs the Stability of Antibacterial Silver-Copper Nanoalloys", Biophysics and Biochemistry, 1, 70-77 (2013)
  • O.E. Onat, S. Gulsuner, K. Bilguvar, A.N. Basak, H. Topaloglu, M. Tan, U. Tan, M. Gunel, T. Ozcelik, "Missense mutation in the ATPase, aminophospholipid transporter protein ATP8A2 is associated with cerebellar atrophy and quadrupedal locomotion", European J of Human Genetics, 21, 281-285 (2013)  PDF
  • S. Arslan, T. Ersahin, R. Cetin-Atalay, C. Gunduz-Demir, "Attributed Relational Graphs for Cell Nucleus Segmentation in Fluorescence Microscopy Images", IEEE Trans on Medical Imaging, 32, 1121-1131 (2013)  PDF
  • S. Gunes, R. Asci, G. Okten, F. Atac, O.E. Onat, G. Ogur, O. Aydin, T. Ozcelik, H. Bagci, "Two males with SRY-Positive 46,XX Testicular Disorder of Sex Development", Systems Biology in Reproductive Medicine, 59, 42-47 (2013)
 2012
  • A. Nissan, A. Stojadinovic, S. Mitrani-Rosenbaum, D. Halle, R. Grinbaum, M. Roistacher, A. Bochem, B.E. Dayanc, G. Ritter, I. Gomceli, E.B. Bostanci, M. Akoglu, Y-T. Chen, L.J. Old, A.O. Gure, "Colon cancer associated transcript-1: A novel RNA expressed in malignant and pre-malignant human tissues", Int J of Cancer, 130, 1598-1606 (2012)
  • G. Bayramoglu, I. Gursel, M. Yilmaz, M.Y. Arica, "Immobilization of laccase on itaconic acid grafted and Cu(II) ion chelated chitosan membrane for bioremediation of hazardous materials", J of Chem. Technol. Biotechnol., 87, 530-539 (2012)
  • N. Lacin, G. Utkan, T. Kutsal, E. Piskin, B. Dedeoglu, I. Yulug, "TIMP-2 Gene Transfer by Positively Charged PEG-Lated Monosized Polycationic Carrier to Smooth Muscle Cells", J of Nanoparticle Research, 14, 694-1--9 (2012)
  • C.F. Koyuncu, S. Arslan, I. Durmaz, R. Cetin-Atalay, C. Gunduz-Demir, "Smart Markers for Watershed-Based Cell Segmentation", Plos One, 7, 48664-1--11 (2012)  PDF
  • M. Yarim, M. Koksal, I. Durmaz, R. Cetin-Atalay, "Cancer Cell Cytotoxicities of 1-(4-Substitutedbenzoyl)-4-(4-chlorobenzhydryl) piperazine Derivatives", Int J of Molecular Sciences, 13, 8071-8085 (2012)  PDF
  • S. Durdu, G.C. Deniz, D. Balci, C. Zaim, A. Dogan, A. Can, K.C. Akcali, A.R. Akar, "Apoptotic Vascular Smooth Muscle Cell Depletion via BCL2 Family of Proteins in Human Ascending Aortic Aneurysm and Dissection", Cardiovascular Therapeutics, 30, 308-317 (2012)  PDF
  • A.S. Gurkan-Alp, M. Mumcuoglu, C.A. Andac, E. Dayanc, R. Cetin-Atalay, E. Buyukbingol, "Synthesis, anticancer activities and molecular modeling studies of novel indole retinoid derivatives", European J of Medicinal Chemistry, 58, 346-354 (2012)  PDF
  • F.E. Onen-Bayram, I. Durmaz, D. Scherman, J. Herscovici, R. Cetin-Atalay, "A novel thiazolidine compound induces caspase-9 dependent apoptosis in cancer cells", Bioorganic & Medicinal Chemistry, 20, 5094-5102 (2012)  PDF
  • C. Ceran, M. Cokol, S. Cingoz, I. Tasan, M. Ozturk, T. Yagci, "Novel anti-HER2 monoclonal antibiodes: synergy and antagonism with tumor necrosis factor-a", BMC Cancer, 12, 450 (2012)  PDF
  • M. Tuncbilek, E.B. Guven, T. Onder, R. Cetin-Atalay, "Synthesis of Novel 6-(4-Substituted piperazine-1-yl)-9(b-D-ribofuranosyl) purine Derivatives, Which Lead to Senescence-Induced Cell Death in liver Cancer Cells", J of Medicinal Chemistry, 55, 3058-3065 (2012)  PDF
  • D.L. Ligons, C. Tuncer, B.A Linowes, I.M. Akcay, S. Kurtulus, E. Deniz, B.A. Arslan, S.I. Cevik, H.R. Keller, M.A. Luckey, L. Feigenbaum, T. Moroy, T. Ersahin, R. Cetin-Atalay, B. Erman, J-H. Park, "CD8 Lineage-specific Regulation of Interleukin-7 Receptor Expression by the Transcriptional Repressor Gfi1", Journal of Biological Chemistry, 287, 34386-34399 (2012)  PDF
  • F. Ayaloglu-Butun, E. Terzioglu-Kara, Z. Tokcaer-Keskin, K.C. Akcali, "The Effect of Estrogen on Bone Marrow-Derived Rat Mesenchymal Stem Cell Maintenance: Inhibiting Apoptosis Through the Expression of Bcl-xL and Bcl-2", Stem Cell Rev and Rep, 8, 393-401 (2012)
  • J.A. Denver, A.M. Fuiten, O. Konu, J.A. Wilkinson, "Cryptic Torrent Frogs of Myanmar: An Examination of the Amolops marmoratus Species Complex with the Resurrection of Amolops afghanus and the identification of a New Species", Copeia, 1, 57-76 (2012)  PDF
  • M. Koksal, M. Yarim, I. Durmaz, R. Cetin-Atalay, "Synthesis and Cytotoxic Activity of Novel 3-methyl-1-[(4-substitutedpiperazin-1-yl)methyl]-1H-indole Derivatives", Arzneimittelforschung, 62, 389-394 (2012)
  • S. Yavas, M. Erdogan, K. Gurel, F.O.Ilday, Y.B. Eldeniz, U. Tazebay, "Fiber laser-microscope system for femtosecond photodisruption of biological samples", Biomedical Optics Express, 3, 605-611 (2012)  PDF
  • T.T. Onder, N. Kara, A. Cherry, A.U. Sinha, N. Zhu, K.M. Bernt, P.Cahan, B.O. Mancarci, J. Unternaehrer, P.B. Gupta, E.S. Lander, S.A. Armstrong, G.Q. Daley, "Chromatin-modifying enzymes as modulators of reprogramming", Nature, 483, 598-602 (2012)  PDF
  • Z. Isik, T. Ersahin, V. Atalay, C. Aykanat, R. Cetin-Atalay, "A Signal Transduction Score Flow Algorithm for Cyclic Cellular Pathway Anlaysis, which Combines Transcriptome and ChIP-seg Data", Molecular BioSystems, 8, 3224-3231 (2012)  PDF
 2011
  • E. Mete, I. Gul, R. Cetin-Atalay, U. Das, E. Sahin, M. Gul, C. Kazaz, J.R. Dimmock, "The design and cytotoxic evaluation of some 1-aryl-3-isopropyl-amino-1-propanone hydrochlorides towards human Huh-7 hepatoma cells", Archiv der Pharmazie, 11, 333-339 (2011)  PDF
  • O. Gursoy-Yuzugullu, H. Yuzugullu, M. Yilmaz, M. Ozturk, "Aflatoxin genotoxicity is associated with a defective DNA damage response bypassing p53 activation", Liver International, 31, 561-571 (2011)  PDF
  • C. Sucularli, S. Senturk, M. Ozturk, O. Konu, "Dose- and Time-dependent Expression Patterns of Zebrafish Prthologs of Selected E2F Target Genes in Response to Serum Starvation/Replenishment", Molecular Biology Reports, 38, 4111-4123 (2011)
  • F. Buontempo, T. Ersahin, S. Missiroli, S. Senturk, D. Etro, M. Ozturk, S. Capitani, R. Cetin- Atalay, M.L. Neri, "Inhibition of Akt signaling in hepatoma cells induces apoptotic cell death independent of Akt activation status", Investigational New Drugs, 29, 1303-1313 (2011)  PDF
  • B. Vural, E. Ugurel, E. Tuzun, M. Kurtuncu, L. Zuliani, F. Cavus, S. Icoz, E. Erdag, A. Gul, A.O. Gure, A. Vincent, U. Ozbek, M. Eraksoy, G. Akman-Demir, "Anti-neuronal and stress-induced-phosphoprotein 1 antibodies in neuro-Behcet's disease", J of Neuroimmunology, 239, 91-97 (2011)  PDF
  • E. Erikci, M. Gursel, I. Gursel, "Differential immune activation following encapsulation of CpG oligodeoxynucleotides in nanoliposomes", Biomaterials, 32, 1715-1723 (2011)  PDF
  • G. Tincer, S. Yerlikaya, F.C. Yagci, T. Kahraman, O.M. Atanur, O. Erbatur, I. Gursel, "Immunostimulatory activity of polysaccharide-poly(I:C) nanoparticles", Biomaterials, 32, 4275-4282 (2011)  PDF
  • P. Erkekoglu, W. Rachidi, O.G. Yazgullu, B. Giray, M. Ozturk, A. Favier, F. Hincal, "Induction of ROS, p53, p21 in DEHP- and MEHP-exposed LNCaP cells-protection by selenium compunds", Food and Chemical Toxicology, 49, 1565-1571 (2011)  PDF
  • S. Gulsuner, A.B. Tekinay, K. Doerschner, H. Boyaci, K. Bilguvar,H. Unal, A. Ors, O.E. Onat, .E. Atalar, A.N. Basak, H. Topaloglu, T. Kansu, M. Tan, U. Tan, M. Gunel, T. Ozcelik, "Homozygosity mapping and targeted genomic sequencing reveal the game responsible for cerebellar hypoplasia and quadrupedal locomotion in a consanguineous kindred", Genome Research..  PDF
  • J. Bousquet, ..., M. Ozturk, ..., C. Auffray, "Systems medicine and integrated care to combat chronic noncommunicable diseases", Genome Medicine, 3, 43 (2011)
  • E. Birben, C. Sackesen, S. Kazani, G. Tincer, C. Karaaslan, B. Durgunsu, I. Gursel, M.E. Wechsler, E. Israel, O. Kalayci, "The effects of an insertion in the 5'UTR of the AMCase on gene expression and pulmonary functions", Respiratory Medicine, 105, 1160-1169 (2011)  PDF
  • G. Bayramoglu, K.C. Akcali, S. Gultekin, E. Bengu, M.Y. Arica, "Preparation and Characterization of Poly(hydroxyethyl methacrylate-co-poly(ethyl-eneglycol-methacrylate)/Hydroxypropyl-chitosan) Hydrogel Films: Adhesion of Rat Mesenchymal Stem Cells", Macromolecular Research, 19, 385-395 (2011)
  • K. Kaya, G. Karakulah, C. Yakicier, A.C. Acar, O. Konu, "mESAdb:microRNA Expression and Sequence Analysis Database", Nucleic Acids Research, 39, 170-180 (2011)  PDF
  • M. Erdogan, B. Oktem, H. Kalaycioglu, S. Yavas, P.K. Mukhopadhyay, K. Eken, K. Ozgoren, Y. Aykac, U. Tazebay, F.O. Ilday, "Texturing of titanium (Ti6Al4V) medical implant surfaces with MHz-repetition-rate femtosecond and picosecond Yb-doped fiber lasers", Optics Express, 19, 10986 (2011)  PDF
  • M. Taner, N. Sayar, I. Yulug, S. Suzer, "Synthesis, characterization and antibacterial investigation of silver-copper nanoalloys", J of Materials Chemistry, 21, 13150-13154 (2011)  PDF
  • P. Telkoparan, U. Tazebay, "Ras Family of Proteins: Cellular Function, Molecular Control, and its Role in Oncogenesis", Turkish Journal of Biochemistry, 36, 367-373 (2011)
  • T. Barak, K.Y. Kwan, A. Louvi, V. Demirbilek, ..., H. Boyaci, K. Doerschner, ....., E. Atalar, C. Yalcinkaya, A. Dincer, ... , T. Ozcelik, .... , M. Gunel, "Recessive LAMC3 mutations cause malformations of occipital cortical development", Nature Genetics, 43, 590-594 (2011)  PDF
  • V.R. Babaev, R.P. Runner, D. Fan, L. Ding, Y. Zhang, H. Tao, E. Erbay, C.Z. Gorgun, S. Fazio, G.S. Hotamisligil, M.F. Linton, "Macrophage Mal1 deficiency suppresses atherosclerosis in low-density lipoprotein receptor-null mice by activating peroxisome proliferator-activated receptor-g-regulated genes", Arteriosclerosis, Thrombosis, and Vascular Biology, 31, 1283-1290 (2011)  PDF
 2010
  • L.E. Kolb, Z. Arlier, C. Yalcinkaya, A.K. Ozturk, J.A. Moliterno, O. Erturk, F. Bayrakli, B. Korkmaz, K. Bilguvar, M.L. DiLuna, K. Yasuno, T. Ozcelik, B. Tuysuz, M.W. State, M. Gunel, "Novel VLDLR microdeletion identified in two turkish siblings with pachygyria and pontocerebellar atrophy", Neurogenetics, 11, 319-325 (2010)
  • M. Mumcuoglu, S. Bagislar, H. Yuzugullu, H. Alotaibi, S. Senturk, P. Telkoparan, B. Gur-Dedeoglu, B. Cingoz, B. Bozkurt, U.H. Tazebay, I. Yulug, K.C. Akcali, M. Ozturk, "The Ability to Generate Senescent Progeny as a Mechanism Underlying Breast Cancer Cell Heterogeneity", Plos One, 5, 11288--1-12 (2010)
  • O.S. Sarac, V. Atalay, R. Cetin-Atalay, "GOPred: GO molecular function prediction by combined classifiers", Plos One, 5, 12382 (2010)
  • E. Oztas, M.E. Avci, A. Ozcan, A.E. Sayan, E. Tulchinsky, T. Yagci, "Novel monoclonal antibodies detect Smad-Interacting Protein 1 (SIP1) in the cytoplasm of human cells from multiple tumor tissue arrays", Experimental and Molecular Pathology, 89, 182-189 (2010)  PDF
  • P. Erkekoglu, W. Rachidi, O. Gursoy-Yazgullu, B. Giray, S. Favier, M. Ozturk, F. Hincal, "Evaluation of cytotoxicity and oxidative DNA damaging effects of Di(2-ethylhexyl)-phthalate (DEHP) and mono (2-ethylhexyl)-phthalate (MEHP) on MA-10 Leydig cells and protection by selenium", Toxicology and Applied Pharmacology, 248, 52-62 (2010)  PDF
  • S. Senturk, M. Mumcuoglu, O. Gursoy-Yuzugullu, B. Cingoz, K.C. Akcali, M. Ozturk, "Transforming Growth Factor-Beta Induces Senescence in Hepatocellular Carcinoma Cells and Inhibits Tumor Growth", J of Hepatology, 52, 966-974 (2010)  PDF
  • T. Ozcelik, M. Kanaan, K.B. Avraham, D. Yannoukakos, A. Megarbane, G.O. Tadmouri, L. Middleton, G. Romeo, M.C. King, E.L. Lahad, "Collaborative genomics for human health and cooperation in the Mediterranean region", Nature Genetics, 42, 641-645 (2010)
  • E. Kavak, A. Najafov, N. Ozturk, T. Seker, K. Cavusoglu, T. Aslan, A.D. Duru, T. Saygili, G. Hoxhaj, M.C. Hiz, D. Ozer-Unal, B. Birgul-Iyison, M. Ozturk, A. Koman, "Analysis of the Wnt/B-catenin/TCF4 pathway using SAGE, genome-wide microarray and promoter analysis: Identification of BRI3 and HSF2 as novel targets", Cell Signaling, 22, 1523-1435 (2010)
  • F.C. Yagci, O. Aslan, M. Gursel, G. Tincer, Y. Ozdamar, K. Karatepe, K.C. Akcali, I. Gursel, "Mammalian Telomeric DNA Suppresses Endotoxin-induced Uveitis", Journal of Biological Chemistry, 285, 28806-1--6 (2010)
  • H. Alotaibi, E. Yaman, D. Salvatore, V.D. Dato, P. Telkoparan, R.D. Lauro, U.H. Tazebay, "Intronic Elements in the Na/I Symporter Gene (NIS) Interact with Retinoic Acid Receptors and Mediate Initiation of Transcription", Nucleic Acids Research, 38, 3172-3185 (2010)
  • H. Skirton, C. Lewis, A. Kent, D.A. Coviello...T. Ozcelik, ..., L. Tranebjaerg, "Genetic education and the challenge of genomic medicine: development of core competences to support preparation of health professionals in Europe", European J of Human Genetics, 18, 972-977 (2010)
  • L. Carkacioglu, R. Cetin-Atalay, O. Konu, V. Atalay, T. Can, "Bi-k-Bi Clustering: Mining Large Scale Gene Expression Data Using Two-Level Biclustering", Int J of Data Mining and Bioinformatics, 4, 699-719 (2010)
  • T. Acun, E. Terzioglu, O. Konu, M. Ozturk, M.C. Yakicier, "Mdm2 Snp309 G allele displays high frequency and inverse correlation with somatic p53 mutations in hepatocellular carcinoma", Mutation Research, 684, 106-108 (2010)  PDF
  • Y. Erac, C. Selli, B. Kosova, K.C. Akcali, M. Tosun, "Expression levels of TRPC1 and TRPC6 ion channels are reciprocally altered in aging rat aorta: Implications for age-related vasospastic disorders", Age, 32, 223-230 (2010)
  • Z. Tokcaer-Keskin, Z.G. Dikmen, F. Ayaloglu-Butun, S. Gultekin, S.M. Gryaznov, K.C. Akcali, "The Effect of Telomerase Template Antagonist GRN163L on Bone-Marrow-Derived Rat Mesenchymal Stem Cells is Reversible and Associated with Altered Expression of Cyclin d1, cdk4 and cdk6", Stem Cell Rev and Rep, 6, 224-233 (2010)
 2009
  • E. Uz, C. Mustafa, R. Topaloglu, Y. Bilginer, A. Dursun, O. Kasapcopur, S. Ozen, A. Bakkaloglu, T. Ozcelik, "Increased frequency of extremely skewed X chromosome inactivation in juvenile idiopathic arthritis", Arthritis & Rheumatism, 60, 3410-3412 (2009)
  • E. Yaman, R. Gasper, C. Koerner, A. Wittinghofer, U. Tazebay, "RasGEF1A and RasGEF1B are guanine nucleotide exchange factors that discriminate between Rap GTP-binding proteins and mediate Rap2-specific nucleotide exchange", FEBS Journal, 276, 4607-4616 (2009)
  • G. Chabchoub, E. Uz, A. Maalej, C.A. Mustafa, A. Rebai, M. Mnif, Z. Bahloul, N.R. Farid, T. Ozcelik, H. Ayadi, "Analysis of skewed X-chromosome inactivation in females with rheumatoid arthritis and autoimmune thyroid diseases", Arthritis & Rheumatism, 11, 106-1--8 (2009)
  • M. Ozturk, A. Arslan-Ergul, S. Bagislar, S. Senturk, H. Yuzugullu, "Senescence and immortality in hepatocellular carcinoma", Cancer Letters, 286, 103-113 (2009)  PDF
  • G. Bayramoglu, I. Gursel, Y. Tunali, M.Y. Arica, "Biosorption of phenol and 2-chlorophenol by Funalia trogii pellets", Bioresource Technology, 100, 2685-2691 (2009)  PDF
  • S.D. Selcuklu, M.C. Yakicier, A.E. Erson, "An investigation of microRNAs mapping to breast cancer related genomic gain/loss regions", Cancer Genetics & Cytogenetics, 189, 15-23 (2009)
  • H. Yazugullu, K. Benhaj, N. Ozturk, S. Senturk, E. Celik, A. Toylu, N. Tasdemir, M. Yilmaz, E. Erdal, K.C. Akcali, N. Atabey, M. Ozturk, "Canonical Wnt signaling is antagonized by noncanonical Wnt5a in hepatocellular carcinoma cells", Molecular Cancer, 8, 1-20 (2009)
  • A.E. Sayan, T.R. Griffiths, R. Pal, G.J. Browne, A. Ruddick, T. Yagci, R. Edwards, N.J. Mayer, H. Qazi, S. Goyal, S. Fernandez, K. Straatman, G.D.D. Jones, K.J. Bowman, A. Colquhoun, J.K. Mellon, M. Kriajevska, E. Tulchinsky, "SIP1 protein protects cells from DNA damage-induced apoptosis and has independent prognostic value in bladder cancer", Proceedings of National Academy of Sciences USA, 106, 14884-14889 (2009)
  • B. Gur, O. Konu, B. Bozkurt, G. Ergul, S. Seckin, I. Yulug, "Identification of endogenous reference genes for qRT-PCR analysis in normal matched breast tumor tissues", Oncology Research, 17, 353-365 (2009)
  • B. Sayan, N.C.T. Emre, M.B. Irmak, M. Ozturk, R. Cetin-Atalay, "Nuclear Exclusion of p33ING1b Tumor Suppressor Protein: Explored in HCC Cells Using a New Highly Specific Antibody", Hybridoma, 28, 1-6 (2009)
  • B. Vural, A. Demirkan, E. Ugurel, Z. Kalaylioglu-Wheeler, B.A. Esen, A.O. Gure, A. Gul, U. Ozbek, "Seroreactivity against PTEN-induced putative kinase 1 (PINK1) in Turkish patients with Behcet's disease", Clinical and Experimental Rheumatology, 27, 67-72 (2009)
  • Z. Tokcaer-Keskin, A. R. Akar, F. Ayaloglu, E. Terzioglu-Kara, S. Durdu, U. Ozyurda, K.C. Akcali, "Timing of Induction Cardiomyocyte Differentiation for in vitro Cultured Mesenchymal Stem Cells: A Perspective for Emergencies", Canadian J of Physiology and Pharmacology, 87, 143-150 (2009)
 2008
  • J. Wang, R. Gutala, Y.Y. Hwang, J.M. King, O. Konu, J.Z. Ma, M.D. Li, "Strain- and region-specific gene expression profiles in mouse brain in response to chronic nicotine treatment", Genes Brain and Behavior, 7, 78-87 (2008)
  • T. Ozcelik, "X chromosome inactivation and female pred,sposition to autoimmunity", Clinical Reviews in Allergy & Immunology, 34, 348-351 (2008)  PDF
  • E. Uz, L.S. Loubiere, V.K. Gadi, Z. Ozbalkan, J. Stewart, J.L. Nelson, T. Ozcelik, "Skewed X-chromosome inactivation in scleroderma", Clinical Reviews in Allergy & Immunology, 34, 352-355 (2008)  PDF
  • V. Plagnol, E. Uz, C. Wallace, H. Stevens, D. Clayton, T. Ozcelik, J.A. Todd, "Extreme clonality in lymphoblastoid cell lines with implications for allele specific expression analyses", Plos One, 3, 2966 (2008)
  • I. Yulug, B. Gur-Dedeoglu, "Functional Genomics in Translational Cancer Research: Focus on Breast Cancer", Briefings in Functional Genomics and Proteomics..
  • O. Buyuktanir, T. Yildirim, C. Yakicier, O. Genc, N. Yurdusev, "A Recombinant PvpA Protein-Based Diagnostic Prototype for Rapid Screening of Chicken Mycoplasma gallisepticum infections", Veterinary Microbiology, 129, 139-149 (2008)  PDF
  • O.S. Sarac, O. Gursoy-Yuzugullu, R. Cetin-Atalay, V. Atalay, "Subsequence based feature map for protein function classification", Computational Biology and Chemistry, 32, 122-130 (2008)
  • B. Gur, O. Konu, S. Kir, A.R. Ozturk, B. Bozkurt, G. Ergul, I. Yulug, "A Resampling Based Meta-Analysis for Detection of Differential Gene Expression in Breast Cancer", BMC Genomics, 8, 396-1--16 (2008)  PDF
  • M.E. Avci, O. Konu, T. Yagci, "Quantification of SLIT-ROBO Transcripts in Hepatocellular Carcinoma Reveals Two Groups of Genes with Coordinate Expression", BMC Cancer, 8, 1-11 (2008)
  • T. Ozcelik, N. Akarsu, E. Uz, S. Caglayan, S. Gulsuner, O.E. Onat, M. Tan, U. Tan, "Reply to Herz et al. And Humprey et al.: Genetic heterogeneity of cerebellar hypoplasia with quadruprdal locomotion", Proceedings of National Academy of Sciences USA, 105, 32-33 (2008)
  • T. Ozcelik, N. Akarsu, E. Uz, S. Caglayan, S. Gulsuner, O.E. Onat, M. Tan, U. Tan, "Mutations in the very low-density lipoprotein receptor VLDLR cause cerebellar hypoplasia and quadrupedal locomotion in humans", Proceedings of National Academy of Sciences USA, 105, 4232-4236 (2008)
  • E. Canbay, B.Gur-Dedeoglu, B. Bozkurt, M. Karabeyoglu, B. Unal, O. Yildirim, O. Cengiz, I. Yulug, "Inhibition of focal adhesion kinase with her-2 targeted antibody pertuzumab (Omnitarg (R), 2C4) in breast cancer cells", Gene Therapy and Molecular Biology, 12, 293-300 (2008)
  • H. Alotaibi, M.D. Ricciardone, M. Ozturk, "Homozygosity at variant MLH1 can lead to secondary mutation in NF1, neurofibromatosis type I and early onset leukemia", Mutation Research, 637, 209-214 (2008)  PDF
  • L. Sabater, M. Titulaer, A. Saiz, J. Verschuuren, A.O. Gure, F. Graus, "SOX1 antibodies are markers of paraneoplastic Lambert-Eaton myasthenic syndrome", Neurology, 70, 924-928 (2008)
  • M.K. Abak, O. Aktas, R. Mammadov, I. Gursel, A. Dana, "Parametrically coupled multiharmonic force imaging", Applied Physics Letters, 92, 223113-1-3 (2008)  PDF
  • S. Kadir, A.P. Onen-Hall, S.N. Aydin, C. Yakicier, N. Akarsu, M. Tuncer, "Environmental effect and genetic influence: a regional cancer predisposition survey in the Zonguldak region of Northwest Turkey", Environmental Geology, 54, 391-409 (2008)
  • Y. Kaplan, I. Vargel, T. Kansu, B. Akin, E. Rohmann, S. Kamaci, E. Uz, T. Ozcelik, B. Wollnik, N.A. Akarsu, "Skewed X-inactivation in an X-linked Nystagmus Family Resulted From a Novel, p.R229G, Missence Mutation in the FRMD7 Gene", British J of Ophthalmology, 92, 135-141 (2008)
 2007
  • I.T. Aydin, Z. Tokcaer, A. Dalgic, O. Konu, K.C. Akcali, "Cloning and expression profile of FLT3 gene during progenitor cell-dependent liver regeneration", J of Gastroenterology and Hepatology, 22, 2181-2188 (2007)
  • O. Hatirnaz, U. Ure, C. Ar, C. Akyerli, T. Sosyal, B. Ferhanoglu, T. Ozcelik, U. Ozbek, "The SOCS-1 gene methylation in chronic myleoid leukemia patients", American J of Hematology, 82, 729-730 (2007)
  • E. Uz, I. Dolen, A.R. Al, T. Ozcelik, "Extremely skewed X-chromosome inactivation in pre-eclampsia", Human Genetics, 121, 101-105 (2007)  PDF
  • T. Ozcelik, "To the editor: X-linked clonality testing and autoimmune diseases", Blood, 110, 2769 (2007)
  • A. Yagci, T. Yagci, B. Sener, Y. Suziki, K. Ahmed, "Sulfatide Mediates Attachment of Pseudomonas Aeruginosa to Human Pharyngeal Epithelial Cells", New Microbiologica, 30, 165-169 (2007)
  • D. Jager, V. Filonenko, I. Gout, D. Frosina, S. Eastlake-Wade, S. Castelli, Z. Varga, H. Moch, Y.T. Chen, K.J. Busam, I. Seil, L.J. Old, A. Nissan, C. Frei, A.O. Gure, A. Knuth, A.A. Jungbluth, "NY-BR-1 is a differentiation antigen of the mammary gland", Appl. Immun. Mol. Morphol., 15, 77-83 (2007)
  • H. Celikkaya, C. Ciraci, E. Oztas, M.E. Avci, M. Ozturk, T. Yagci, "Immunization with UV-induced apoptotic cells generates monoclonal antibodies against proteins differentially expressed in hepatocellular carcinoma cell lines", Hybridoma, 26, 55-61 (2007)
  • M. Tuncel, D. Aydin, E. Yaman, U.H. Tazebay, D. Guc, A.L. Dogan, B. Tasbasan, O. Ugur, "The comparative effects of gene modulators on thyroid specific genes and radioiodine uptake", Cancer Biotheraphy and Radiochemicals, 22, 281-288 (2007)
  • R. Spisek, A. Kukreja, L.C. Chen, P. Matthews, A. Mazumder, D. Vesole, S. Jagannath, H.A. Zebroski, A.J. Simpson, G. Ritter, B. Durie, J. Cowley, JD Jr. Shaughnessy, M.J. Scanlan, A.O. Gure, B. Barlogie, M.V. Dhodapkar, "Frequent and specific immunity to the embryonal stem cell-associated antigen SOX2 in patients with monoclonal gammopathy", J of Exp Med, 204, 831-840 (2007)
 2006
  • P. Ozcelik, F.B. Bezirci, Y. Suzuki, H. Uzawa, Y. Nishida, K. Kobayashi, T. Suzuki, D. Miyamoto, T. Nagatake, K. Ahmed, "Sulfatide and its synthetic analogues recognition by Moraxella catarrhalis", Microbiology and Immunology, 50, 967-970 (2006)
  • S. Ataergin, F. Arpaci, T. Cetin, S. Guran, C. Yakicier, M. Beyzadeoglu, A. Ozet, "Donor Cell Leukemia in a Patient Developing 11 months After an Allogeneic Bone Marrow Transplantation for Chronic Myeloid Leukemia", American J of Hematology, 81, 370-373 (2006)
  • E. Dalkic, C. Kuscu, C. Sucularli, I.T. Aydin, K.C. Akcali, O. Konu, "Alternatively spliced Robo2 isoforms in zebrafish and rat", Development Genes and Evolution, 216, 555-563 (2006)
  • H. Alotaibi, E.C. Yaman, E. Demirpence, U.H. Tazebay, "Unliganded estrogen receptor-x activates transcription of the mammary gland Na+/I- symporter gene", Biochemical and Biophysical Research Communications, 345, 1487-1496 (2006)  PDF
  • P.H. Baglan, E. Sarinay, K. Ahmed, M. Ozkan, G. Bozdayi, A.M. Bozdayi, A. Ozden, "Turkish isolates of Helicobacter pylori belong to the Middle Eastern genotypes", Clinical Microbiology and Infection, 12, 97-98 (2006)
  • M. Braunstein, T. Ozcelik, S. Bagislar, V. Vakil, E.L. Smith, K. Dai, C.B. Akyerli, O.A. Batuman, "Endothelial progenitor cells display clonal restriction in multiple myeloma", BMC Cancer, 6, 161 (2006)
  • T. Ozcelik, E. Uz, S. Bagislar, C.A. Mustafa, A. Gursoy, N. Akarsu, G. Toruner, N. Kamel, S. Gullu, "Evidence from autoimmune thyroiditis of skewed X-chromosome inactivation in female predisposition to autoimmunity", European J of Human Genetics, 14, 791-797 (2006)
  • A. Dursun, H.G. Durakbasi-Dursun, A.G. Zamani, Z.G. Gulbahar, R. Dursun, C. Yakicier, "Genetic analysis of MEFV gene pyrin domain in patients with Behcet's disease", Mediators of Inflammation, 2006, 41783-1--4 (2006)
  • A. Petenkaya, B. Bozkurt, O. Akilli-Ozturk, H.S. Kaya, B. Gur-Dedeoglu, I. Yulug, "Lack of Association Between the MDM2-SNP309 Polymorphism and Breast Cancer Risk", Anticancer Research, 26, 4975-4978 (2006)
  • B. Karahalil, N.A. Kocabas, T. Ozcelik, "DNA repair gene polymorphisms and bladder cancer susceptibility in a Turkish population", Anticancer Research, 26, 4955-4958 (2006)
  • K. Benhaj, K.C. Akcali, M. Ozturk, "Redundant expression of canonical Wnt ligands in human breast cancer cell lines", Oncology Reports, 5, 701-717 (2006)
  • N. Ozturk, E. Erdal, M. Mumcuoglu, K.C. Akcali, O. Yalcin, S. Senturk, A. Arslan-Ergul, B. Gur, I. Yulug, R. Cetin-Atalay, C. Yakicier, T. Yagci, M. Tez, M. Ozturk, "Reprogramming of replicative senescence in hepatocellular carcinoma-derived cells", Proceedings of National Academy of Sciences USA, 103, 2178-2183 (2006)
  • O.E. Onat, M. Tez, T. Ozcelik, G.A. Toruner, "MDM2 T309G polymorphism is associated with bladder cancer", Anticancer Research, 26, 3473-3475 (2006)
  • P.H. Baglan, G. Bozdayi, M. Ozkan, K. Ahmed, M. Bozdayi, A. Ozden, "Clarithromycin resistance prevalence and iceA gene status in Helicobacter pylori clinical isolates in Turkish patients with duodenal ulcer and functional dyspepsia", J of Microbiology, 44, 409-416 (2006)
  • S. Bagislar, I. Ustuner, B. Cengiz, F. Soylemez, C.B. Akyerli, S. Ceylaner, G. Ceylaner, A. Acar, T. Ozcelik, "Extremely skewed X-chromosome inactivation patterns in women with recurrent spontaneous abortion", Australian New Zealand J of Obstetrics Gynaecology, 46, 384-387 (2006)
 2005
  • G. Akgul, A. Erturk, M. Turkoz, T. Turan, A. Ichinose, T. Nagatake, K. Ahmed, "Role of lipooligosaccharide in the attachment of Moraxella catarrhalisto human pharyngeal epithelial cells", Microbiology and Immunology, 49, 931-935 (2005)
  • K.C. Akcali, M. Sahiner, T. Sahiner, "The Role of BCL-2 Family of Genes During Kindling", Epilepsia, 46, 217-223 (2005)
  • E. Erdal, N. Ozturk, T. Cagatay, E. Eksioglu-Demiralp, M. Ozturk, "Lithium-mediated down-regulation of PKB/Akt and Cyclin E with growth inhibition in hepatocellular carcinoma cells", Int J of Cancer, 115, 903-910 (2005)
  • J.K. Kane, Y. Hwang, O. Konu, S.E. Loughlin, F.M. Leslie, M.D. Li, "Regulation of Homer and group I metabotropic glutamate receptors by nicotine", European J of Neuroscience, 21, 1145-1154 (2005)
  • Z. Ozbalkan, S. Bagislar, S. Kiraz, C.B. Akyerli, H.T.E. Ozer, S. Yavuz, A.M. Birlik, M. Calguneri, T. Ozcelik, "Skewed X-chromosome inactivation in blood cells of women with scleroderma", Arthritis & Rheumatism, 52, 1564-1570 (2005)
  • C.B. Akyerli, M. Beksac, M. Holko, M. Frevel, K. Dalva, U. Ozbek, E. Soydan, M. Ozcan, G. Ozet, O. Ilhan, G. Gurman, H. Akan, B.R.G. Williams, T. Ozcelik, "Expression of IFITM1 in chronic myeloid leukemia patients", Leukemia Research, 29, 283-6 (2005)  PDF
  • B.D. Aguda, G. Cracium, R. Cetin-Atalay, "Data sources and computational approaches for Generating Models of Gene Regulatory Networks", Reviews in Computational Chemistry, 21, 381-411 (2005)
  • E. Ozyilmaz, W.A. Akan, M. Gulhan, K. Ahmed, T. Nagatake, "Major bacteria of community-acquired respiratory tract infectious in Turkey", Japanese J of Infectious Diseases, 58, 50-52 (2005)
  • H. Zhang, V. Vakil, M. Braunstein, E.L.P. Smith, J. Maroney, L. Chen, K. Dai, J. Berenson, M. Hussain, U. Klueppelberg, A.J. Norin, H.O. Akman, T. Ozcelik, O.A. Batuman, "Circulation Endothelial Progenitor Cells in Multiple Myeloma: Implications and Significance", Blood, 105, 3286-3294 (2005)
  • I. Buyukderim-Ozcelik, T. Ozcelik, "Science flourishes in a secular democracy", Nature, 433, 355 (2005)
  • N. Imirzalioglu, A. Dursun, B. Tastan, Y. Soysal, M.C. Yakicier, "MEFV gene is a probable susceptibility gene for Behcet's disease", Scand J Rheumatology, 33, 56-58 (2005)
  • S. Guran, C. Beyan, O. Nevruz, M.C. Yakicier, Y. Tunca, "A Chronic Myeloid Leukemia Like Syndrome Case With del(12)(p12) in a Li-Fraumeni Syndrome Family", Clinical and Laboratory Haematology, 27, 135-138 (2005)
  • V. Atalay, R.C. Atalay, "Implicit motif distribution based hybrid computational kernel for sequence classification", Bioinformatics, 21, 1429-1436 (2005)
 2004
  • J.K. Kane, O. Konu, J.Z. Ma, M.D. Li, "Nicotine coregulates multiple pathways involved in protein modification/degradation in rat brain", Molecular Brain Research, 132, 181-191 (2004)
  • M. Turk, S. Dincer, I. Yulug, E. Piskin, "In vitro transfection of HeLa cells with temperature sensitive polycationic copolymers", J of Controlled Release, 96, 325-340 (2004)  PDF
  • K.C. Akcali, A. Dalgic, A. Ucar, K.B. Hadj, D. Guvenc, "Expression of bcl-2 Family of Genes During Resection Induced Liver Regeneration: Comparison of Hepatectomized and Sham Groups", World J of Gastroenterology, 10, 279-283 (2004)
  • A.Sevinc, D.Yannoukakos, I.Konstantopoulou, E.Manguoglu, G.Luleci, T.Colak, C.Akyerli, G.Colakoglu, M.Tez, I.Sayek, V.Gerassimos, G.Nasioulas, E.Papadopoulou, L.Florentin, E.Kontogianni, B.Bozkurt, N.Kocabas, A.Karakaya, I. Yulug, T. Ozcelik, "Lack of Association Between RNASEL Arg462Gln Variant and the Riskof Breast Cancer", Anticancer Research, 24, 2547-2550 (2004)
  • C. Uguz, A.T. Dagcan, M. Iscan, I. Togan, "Accumulation of nonylphenol in Gold fish and Suckermouth catfish in the semi static aquarium system", Indian Veterinary Journal, 81, 581-583 (2004)
  • E. Demir, O. Babur, U. Dogrusoz, A. Gursoy, A. Ayaz, G. Gulesir, G. Nisanci, R. Cetin-Atalay, "An Ontology for Collaborative Construction and Analysis of Cellular Pathways", Bioinformatics, 20, 349-356 (2004)
  • H. Ugur, A.E. Sayan, S.O. Ozdamar, Y. Kanpolat, M. Ozturk, "Expression of TAP73 and Delta NP73 in malignant gliomas", Oncology Reports, 11, 1337-1341 (2004)
  • T. Voeltzel, A.P. Morel, M.C. Rostan, J. Ji, C. Chiodino, F. Ponchel, J. Vigouroux, C.C. Fromentel, T. Soussi, M. Ozturk, "A New Set of Monoclonal Antibodies Directed to Proline-Rich and Central Regions of p53", Hybridoma and Hybridomics, 23, 287-292 (2004)
 2003
  • E.A. Manguoglu, G. Luleci, T. Ozcelik, T. Colak, H. Schayek, M. Akaydi, E. Friedman, "Germline mutations in BRCA1 and BRCA2 genes in Turkish breast/ovarian cancer patterns", Human Mutation, 21, 444-450 (2003)
  • H. Akgul, M. Tez, A.E. Unal, M. Keskek, I. Sayek, T. Ozcelik, "Echinococcus against cancer: Why not?", Cancer, 98, 1998-1999 (2003)
  • M. Gasco, I. Yulug, T. Crook, "Tp53 mutations in familial breast cancer: functional aspects", Human Mutation, 21, 301-306 (2003)
  • U.H. Tazebay, "Mutational analysis of the major proline transporter (PrnB) of Aspergillus nidulans", Molecular Membrane Biology, 20, 285-297 (2003)
  • B.C. Akyerli, U. Ozbek, M. Seyitoglu-Aydin, S. Sırma, T. Ozcelik, "Analysis of MYH Tyr382Asp variants in childhood leukemias", J of Cancer Research and Clinical Oncology, 129, 604-605 (2003)
  • D. Bergamaschi, M. Gasco, L. Hiller, A. Sullivan, N. Syed, G. Trigiante, I. Yulug, M. Merlano, G. Numico, A. Comino, M. Attard, O. Reelfs, B. Gusterson, A.K. Bell, V. Heath, M. Tavassoli, P.J. Farrell, P. Smith, X. Lu, T. Crook, "p53 polymorphism influences response in cancer chemotheraphy via modulation of p73-dependent apoptosis", Cancer Cell, 3, 387-402 (2003)  PDF
  • G. Cakan, M. Turkoz, T.Turan, K. Ahmed, T. Nagatake, "S-carboxymethylcysteine inhibits the attachment of Streptococcus pneumoniae to human pharyngeal epithelial cells", Microbial Pathogenesis, 34, 261-265 (2003)  PDF
  • P. Dincer, B. Balci, Y.Yuva, B. Talim, M. Brockington, D. Dincel, S. Torelli, B.B. Sue, G. Kale, G. Haliloglu, F.O. Gerceker, R.C. Atalay, C. Yakicier, C. Longman, F. Muntoni, H. Topaloglu, "A novel form of recessive limb girdle muscular dystrophy with mental retardation and abnormal expression of alpha-dystroglycan", Neuromuscular Disorders, 13, 771-778 (2003)  PDF
  • K.C. Akcali, G. Gibori, S.A. Khan, "The Involvement of Apoptotic Regulators During in vitro Decidualization", European Journal of Endocrinology, 149, 69-75 (2003)
  • A. Kocatas, A. Gursoy, R. Cetin-Atalay, "Application of Data Mining Techniques to Protein-Protein Interaction Prediction", Lecture Notes in Computer Science, 2869, 316-323 (2003)
  • M. Ozarar, V. Atalay, R. Cetin-Atalay, "Prediction of Protein Subcellular Localization Based on Primary Sequence Data", Lecture Notes in Computer Science, 2869, 611-618 (2003)
  • M. Tez, E. Gocmen, T. Ozcelik, "HER2 overexpression and angiogenesis in breast cancer", Lancet, 362, 1503 (2003)  PDF
  • M.B. Irmak, G. Ince, M. Ozturk, R. Cetin-Atalay, "Acquired tolerance of hepatocellular carcinoma cells to selenium deficiency: a selective survival mechanism?", Cancer Research, 63, 6707-6715 (2003)
 2002
  • T. Erdemir, B. Bilican, T. Cagatay, C.R. Goding, U. Yavuzer, "Saccharomyces cerevisiae C1D is implicated in both non-homologous DNA end joining and homologous recombination", Molecular Microbiology, 46, 947-957 (2002)
  • K.Ahmed, Y. Suzuki, D. Miyamoto, T. Nagatake, "Asialo-GM1 and asialo-GM2 are putative adhesion molecules for Moraxella catarrhalis", Medical Microbiology and Immunology, 191, 5-10 (2002)
  • A. Atalay, T. Crook, M. Ozturk, I. Yulug, "Identification of genes induced by BRCA1 in breast cancer cells", Biochemical and Biophysical Research Communications, 299, 839-846 (2002)  PDF
  • T. Ozcelik, "Uncovering the complex mysteries of mosaicism", Nature, 417, (6889):588 (2002)
  • A. Ichinose, K. Ahmed, K. Watanabe, S. Izumi, T. Hirayama, T. Nagatake, "An agar-coated cellophane method for bacterial observation using scanning and transmission electron microscopy", J of Electron Microscopy Technology for Medicine and Biology, 16, 015-020 (2002)
  • A. Sullivan, M. Yuille, C. Repellin, A. Reddy, O. Reelfs, A. Bell, B. Dunne, B.A. Gusterson, P. Osin, P.J. Farrell, I. Yulug, A. Evans, T. Ozcelik, M. Gasco, T. Crook, "Concomitant inactivation of p53 and Chk2 in breast cancer", Oncogene, 21, 1316-1324 (2002)
  • E. Demir, O. Babur, U. Dogrusoz, A. Gursoy, G. Nisanci, R. Cetin-Atalay, M. Ozturk, "PATIKA: An integrated visual environment for collaborative construction and analysis of cellular pathways", Bioinformatics, 18, 996-1003 (2002)
  • E. Yildiz, A. Oztan, F. Sar, E. Pinartbasi, R. Cetin-Atalay, M. Ozturk, "Molecular characterization of a full genome Turkish Hepatits C Virus 1b isolate (HCV-TR1): a predominant viral form in Turkey", Virus Genes, 25, 169-177 (2002)
  • M. Gasco, A.K. Bell, V. Heath, A. Sullivan, P. Smith, L. Hiller, I. Yulug, G. Numico, M. Merlano, P. Ferrell, M. Tavssoli, B. Gusterson, T. Crook, "Epigenetic inactivation of 14-3-3 sigma in oral carcinoma: association with p16INK4a silencing and HPV negativity", Cancer Research, 62, 2072-2076 (2002)
  • M. Topcu, C. Akyerli, A. Sayi, G. Toruner, R.S. Kocoglu, M. Cimbis, T. Ozcelik, "Somatic mosaicism for a MECP2 mutation associated with classic Rett syndrome ina boy", European J of Human Genetics, 10, 77-81 (2002)
  • T. Cagatay, M. Ozturk, "p53 mutation as a source of abberant B-catenin accumulation in cancer cells", Oncogene, 21, 7971-7980 (2002)
  • T. Erdemir, B. Bilican, D. Oncel, C.R. Goding, U. Yavuzer, "DNA Damage-dependent Interaction of the Nuclear Matrix Protein C1D with Translin-Associated Factor X (TRAX)", J of Cell Science, 115, 207-216 (2002)
 2001
  • G.A. Toruner, C. Akyerli, A. Ucar, T. Aki, N. Atsu, H. Ozen, M. Tez, M. Cetinkaya, T. Ozcelik, "Polymorphisms of glutathione S-transferase genes (GSTM1, GSTP1 and GSTT1) and bladder cancer susceptibility", Archives of Toxicology, 75, 459-464 (2001)
  • R. Topaloglu, C. Akyerli, A. Bakkaloglu, O. Aydintug, S. Ozen, N. Besbas, T. Ozcelik, "Survey of factor V leiden and prothrombin gene mutations in systemic lupus erythematosus", Clinical Rheumatology, 20, 259-261 (2001)
  • A.E. Sayan, B.S. Sayan, N. Findikli, M. Ozturk, "Acquired expression of transcriptionally active p73 in hepatocellular carcinoma cells", Oncogene, 20, 5111-5117 (2001)
  • B.S. Sayan, I.G. Sayan, M. Ozturk, "NAPO as a novel marker for apoptosis", J of Cell Biology, 155, 719-724 (2001)
  • C. Ustun, M. Arat, H. Celebi, H. Akan, O. Ilhan, T. Ozcelik, R.E. Burgess, H. Koc, "Extramedullary relapse following allogeneic stem cell transplantation in acute propmyelocytic leukemia: the role of ATRA", Haematologica (E-journal), 86, E31 (2001)
  • E. Yolcu, B.S. Sayan, T. Yagci, R. Cetin-Atalay, T. Soussi, N. Yurdusev, M. Ozturk, "A monoclonal antibody against DNA binding helix of p53 protein", Oncogene, 20, 1398-1401 (2001)
  • G.A. Toruner, A. Ucar, M. Tez, M. Cetinkaya, H. Ozen, T. Ozcelik, "p53 codon 72 polymorphism in bladder cancer - no devidence of association with increased risk or invasiveness", Urological Research, 29, 393-395 (2001)
  • M. Bekaac, M. Ma, C. Akyerli, M. DerDanielian, L. Zhang, J. Liu, M. Arat, S. Erekul, S. Konuk, H. Koc, T. Ozcelik, R. Vescio, J.R. Berenson, "Frequent demonstration of human herpesvirus 8 (HHV-8) in bone marrow samples from Turkish patients with multiple myeloma (MM)", Leukemia, 15, 1268-1273 (2001)
 2000
  • A.P. Morel, K. Unsal, T. Cagatay, F. Ponchel, B. Carr, M. Ozturk, "p53 but not p16(INK4a) induces growth arrest in retinoblastoma-deficient hepatocellular carcinoma cells", J of Hepatology, 33, 254-265 (2000)  PDF
  • H. Ozdag, M. Tez, I. Sayek, M. Muslumanoglu, O. Tarcan, F. Icli, M. Ozturk, T. Ozcelik, "Germ line BRCA1 and BRCA2 gene mutations in Turkish breast cancer patients", European J of Cancer, 36, 2076-2082 (2000)  PDF
  • R. CetinAtalay, M. Ozturk, "p53 mutations as fingerprints of environmental carcinogens", Pure and Applied Chemistry, 72, 995-999 (2000)
  • C. Eroglu, E. Yildiz, M. Ozturk, E. Pinarbasi, "A highly sensitive and specific enzyme-linked immunosorbent assay of antibodies to hepatitis C virus", ACTA Virologica, 44, 29-33 (2000)
  • S. Mazoyer, … , T. Ozcelik, M. Ozturk, et al, "The exon 13 duplication in the BRCA1 gene is a founder mutation present in geographically diverse populations", American Journal of Human Genetics, 67, 207-212 (2000)  PDF
 1999
  • A. Schmidt, K. Tief, U. Yavuzer, F. Beermann, "Ectopic expression of Ret results in microphathalmia and tumors in the retinal pigment epithelium", Int J of Cancer, 80, 600-605 (1999)
  • A. Gul, A.B. Aslantas, T. Tekinay, M. Konice, T. Ozcelik, "Procoagulant mutations and venous thrombosis in Behcet's disease", Rheumatology, 38, 1298-1299 (1999)
  • C.Ustun, O.Arslan, M.Beksac, H.Koc, G.Gurman, B.Yilmaz, T.Ozcelik. O.Ilhan, H.Akan, M.Ozcan, T.Demirer, A.Uysal, N.Konuk, M.Arat, I.Dilek, H.S.Coskun, "Retrospective comparison of allogeneic peripheral blood stem cell and bone marrow transplantation results from a single center: a focus on the incidence of GVHD and relapse", Biology of Blood and Morrow Transplantation, 5, 28-35 (1999)
  • M. Ozturk, "Genetic aspects of hepatocellular carcinogenesis", Seminars in Liver Disease, 19, 235-242 (1999)
  • M.C. Yakicier, M.B. Irmak, A. Romano, M. Ozturk, "Smad2 and Smad4 gene mutations in hepatocellular carcinoma", Oncogene, 18, 4879-4883 (1999)
  • K. Rothbarth, E. Spiess, B. Juodka, U. Yavuzer, P. Nehls, H. Stammer, D. Werner, "Induction of apoptosis by overexpression of the DNA-binding and DNA-PK-activating protein C1D", J of Cell Science, 112, 2223-2232 (1999)
  • M.D. Galibert, U. Yavuzer, T.J. Dexter, C.R. Goding, "Pax3 and regulation of the melanocyte-specific tyrosinase-related protein-1 promoter", Journal of Biological Chemistry, 274, 26894-26900 (1999)
  • M.D. Ricciardone, T. Ozcelik, B.Cevher, H. Ozdag, M. Tuncer, A. Gurgey, O. Uzunalimoglu, H. Cetinkaya, A. Tanyeli, E. Erken, M. Ozturk, "Human MLH1 deficiency predisposes to hematological malignancy and neurofibromatosis type I", Cancer Research, 59, 290-293 (1999)
  • M.N. Gurcan, M. Koyuturk, H.S. Yildiz, R. Cetin-Atalay, A.E. Cetin, "Identification of relative protein bands in polyacrylamide gel electrophoresis (PAGE) using mult-iresolution snake algorithm", Biotechniques, 26, 1162-1169 (1999)
 1998
  • U. Yavuzer, G.C.M. Smith, T. Bliss, D. Werner, S.P. Jackson, "DNA-end independent activation of DNA-PK is mediated via association with DNA-binding protein C1D", Genes and Development, 12, 2188-2199 (1998)
  • B. Vural, E. Atlioglu, O. Kolusayin, I. Togan, S. Buyukdevrim, T. Ozcelik, "Turkish population data on the HLA-DQ, LDLR, GYPA, HBGG, D7S8 and GC loci", Int J of Legal Medicine, 111, 43-45 (1998)
  • R. Pedeux, N. Al-Irani, C. Marteau, F. Pellicier, R. Branche, M. Ozturk, J. Franchi, J.F. Dore, "Thymidine dinucleotides induce S phase cell cycle arrest in addition to increased melanogenesis in human melanocytes", J of Investigative Dermatology, 111, 472-477 (1998)
  • R. Cetin-Atalay, P.H. Anborgh, R.H. Cool, A. Parmeggiani, "Functional role of the non-catalytic domains of elongation factor Tu in the interactions with ligands", Biochemistry J, 37, 486-495 (1998)
  • N. Falette, M.P. Paperin, I. Treilleux, A.C. Gratadour, N. Peloux, H. Mignotte, N. Tooke, E. Lofman, M. Inganas, A. Bremond, M. Ozturk, A. Puisieux, "Prognostic value of P53 gene mutations in a large series of node-negative breast cancer patients", Cancer Research, 58, 1451-1455 (1998)
  • S. Carreira, T.J. Dexter, U. Yavuzer, D.J. Easty, C.R. Goding, "Brachury-related ranscription factor tbx2 and repression of the melanocyte specific TRP-1 prometer", Molecular and Cellular Biology, 18, 5099-5108 (1998)
  • T.Crook, L.A.Brooks, S.Crossland, P.Osin, K.Baker, J.Waller, E.Philip, P.Smith, I.Yulug, J.Peto, G.Parker, M.J.Allday, M.R.Crompton, B.A.Gusterson, "p53 mutations with frequent novel codons but not a mutator phenotype in BRCA1- and BRCA2- associated breast tumors", Oncogene, 17, 1681-1689 (1998)
 1997
  • Q. Wang, F. Desseigne, C. Lasset, J.C. Saurin, C. Navarro, T. Yagci, I. Keser, H. Bagci, G. Luleci, T. Gelen, J.A. Chayvialle, A. Puisieux, M. Ozturk, "Germline hMSH2 and hMLH1 gene mutations in incomplete HNPCC families", Int J of Cancer, 73, 831-836 (1997)
  • A. Puisieux, M. Ozturk, "TP53 and hepatocellular carcinoma", Pathologie Biologie, 45, 864-870 (1997)
  • M.D. Ricciardone, A.M. Lins, J.W. Schumm, M.M. Holland, "Multiplex systems for the amplification of short tandem repeat loci: Evaluation of laser fluorescence", Biotechniques, 23, 742-747 (1997)
  • U. Ozbek, B. Vural, S. Kalayoglu, T. Soysal, H. Bilgen, S. Yavuz, S. Anak, D. Sargin, G. Gedikoglu, B. Ferhanoglu, T. Akoglu, Y. Tangun, T. Ozcelik, "Evaluation of chimerism with DNA polymorphisms in bone marrow transplantation", Turkish J of Pediatrics, 39, 303-311 (1997)
 1996
  • E. Inanc, J.E. Miller, D. Dibiasio, "Effect of oxygen-supply on metabolism of immobilized and suspended Escherichia-coli", Biotechnology and Bioengineering, 51, 697-702 (1996)
  • A. Gul, U. Ozbek, C. Ozturk, M. Inanc, M. Konice, T. Ozcelik, "Coagulation factor V gene mutation increases the risk of venous thrombosis in Behcet's disease", British J of Rheumatology, 35, 1178-1180 (1996)
  • J.P. Rouault, N. Falette, F. Guehenneux, C. Guillot, R. Rimokh, Q. Wang, C.Berthet, C. Lalle, P. Savatier, B. Pain, M. Ozturk, C. Samaru, A. Puisi, "Identification of BTG2, an antiproliferative, p53-dependent component of the DNA damage cellular rep", Nature Genetics, 14, 482-486 (1996)